PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX72615.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 746aa MW: 82184.7 Da PI: 6.4649 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 57.6 | 2.1e-18 | 59 | 114 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++ +++++ q++e+e++F+++++p+ ++r+eL+++lgL+ q+k+WFqN+R++ k RDX72615.1 59 KKRYHRHSQLQIHEMESFFKECPHPDDKQRKELSRELGLEPLQIKFWFQNKRTQVK 114 688899**********************************************9877 PP | |||||||
2 | START | 191.8 | 3.3e-60 | 251 | 473 | 2 | 206 |
HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEEC CS START 2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevis 86 la a++el ++al++ep+W e +n+ e+l+ f+++ + ++ea+r s+vv+m++++lve+l+d++ qW++ + +a tlev+s RDX72615.1 251 LAVVAMEELARLALSGEPLWIPGTysgsEFLNQNEYLRAFPKGIAsnpsfgLRTEASRQSAVVIMNHVKLVEILMDVN-QWSNVFCgivsRANTLEVLS 348 667799**************9777779899************999*********************************.******99999********* PP TT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXH CS START 87 sg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlph 178 +g galq+m+ae+q++splvp Rd +f+Ry++q+++++w++vd S+d+ ++ ++ R++++pSg+li++++ng+skv+w+eh+++++r +h RDX72615.1 349 TGvagnynGALQVMSAEFQVPSPLVPtRDNYFARYCKQHSDESWAVVDFSLDNLRPSSN--ATSRSRRRPSGCLIQELPNGYSKVIWIEHIEVDDREVH 445 *******************************************************9865..889999******************************** PP HHHHHHHHHHHHHHHHHHHHHTXXXXXX CS START 179 wllrslvksglaegaktwvatlqrqcek 206 +l++ v+sgla+ga +wva l+rqce+ RDX72615.1 446 NLYKKYVNSGLAFGATRWVASLDRQCER 473 **************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 746 aa Download sequence |
MYHSHTNVFD SRQHLLDMSS QRTNSESELG RNREEESGNE ITEPPPSGDE LDPNQPGKKK 60 RYHRHSQLQI HEMESFFKEC PHPDDKQRKE LSRELGLEPL QIKFWFQNKR TQVKAQHERH 120 ENNLLKVENE SLRAENARYK EALSNSQCPS CGGPTSVGEM SFDEQHLRIE NVRLREEIDR 180 MSGIASKYGG KPENSYYSMS SQSQMPSRSV DMGGGNYGAQ SGTVGEIYGG SNPLRALPVP 240 TDSDKPMIVE LAVVAMEELA RLALSGEPLW IPGTYSGSEF LNQNEYLRAF PKGIASNPSF 300 GLRTEASRQS AVVIMNHVKL VEILMDVNQW SNVFCGIVSR ANTLEVLSTG VAGNYNGALQ 360 VMSAEFQVPS PLVPTRDNYF ARYCKQHSDE SWAVVDFSLD NLRPSSNATS RSRRRPSGCL 420 IQELPNGYSK VIWIEHIEVD DREVHNLYKK YVNSGLAFGA TRWVASLDRQ CERLASSMAT 480 NIPAGDLCVI TGPEGRKSTL KLAERMLLSF CTGVGASTAH AWTPLTVGCE DVRVMIRKSM 540 DDPGRPAGIV LNAATSLWLP VPPNIVFDFV RGERSRKQVL CKHFFQWDIL SNTGEVREMA 600 HIANGRDPGN CVSLLRVNSQ NNSNSSQSNM LILQESCTDA TGSYVVYAPV DLISMNAVLS 660 GGNPDYVALL PSGFAVLPDG PGLSNGGPIT DVGTGGCLLT VAFQILVDSV PTAKLSLGSV 720 TTVSGLLKCT VERIQNALRP NTPQTI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G21750.2 | 0.0 | HD-ZIP family protein |