PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX72235.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | E2F/DP | ||||||||
Protein Properties | Length: 259aa MW: 29445.2 Da PI: 4.3385 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 53.1 | 5.2e-17 | 22 | 57 | 34 | 71 |
E2F_TDP 34 LvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 L+s +v ++RRiYDi+NVLe+++liek++kn+i+wkg RDX72235.1 22 LLSTNV--QKRRIYDITNVLEGVGLIEKTSKNHIQWKG 57 567788..****************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence |
MSFMVLLGLI LSFSSGPINF LLLSTNVQKR RIYDITNVLE GVGLIEKTSK NHIQWKGCDG 60 LGPRELEDQV NSLKAEVESL YAEECELDDC IRKKQELLRN LEDKESSQKY LFLTKEDILS 120 LPCFQNQEII AIKAPKASFI EVPDPDEELG FDQRQYTMIV RSATGPIYLY LLSNDDGKFE 180 DDSVKRVKLM NSSWNCNHYR KGGVGLLQSE DDNKNPSESF SLQGSQAFGI QEITPTSFEI 240 EDDYWFQSDP AVSLTELCK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G47870.2 | 1e-68 | E2F/DP family protein |