PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX71938.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

ARF

Protein Properties

Length: 694aa MW: 76915.3 Da PI: 7.3579

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX71938.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	73.1	3.4e-23	118	219	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f k+lt+sd+++ g +++p+ +ae++ ++ + + +d +g++W++++iyr++++r++lt+GW+ Fv+ ++L +gD++vF + +++ l RDX71938.1 118 FAKTLTQSDANNGGGFSVPRYCAETIfprldysADPPVQ--NILAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNHKKLVAGDSIVFL--RAENGDL 212 89**************************997656666..69999****************************************..4488999 PP EEEEE-S CS B3 93 vvkvfrk 99 +v+++r+ RDX71938.1 213 CVGIRRA 219 **997 PP
2	Auxin_resp	110.2	2.2e-36	283	366	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa+ a++k++FevvY+Prast+eF+vk++ ve+al+++++ G Rfkmafetedss++++ +Gt++ v+ +dp++WpnS+Wr+L+ RDX71938.1 283 AANLAANKQPFEVVYYPRASTPEFCVKASLVETALQIRWCSGIRFKMAFETEDSSRISWfMGTISLVQVADPLNWPNSPWRLLQ 366 7899******************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 694 aa Download sequence
MITFMDSKEK SKEVEKCLDP QLWHACAGGM VQMPAVNSKV YYFPQGHAEH ACGAVNFRNC 60 PKVPPLVPCR VSAVKFMADP ETDEVYAKLR LVPLNANDAD YDRDVVVGGE TQDKPASFAK 120 TLTQSDANNG GGFSVPRYCA ETIFPRLDYS ADPPVQNILA KDVHGETWKF RHIYRGTPRR 180 HLLTTGWSTF VNHKKLVAGD SIVFLRAENG DLCVGIRRAK KGIAGGPEAS SGWNPAGGNC 240 PMPYGSFSPF LREDDNRILR NGLNPSVGMM GRGKVRPEAV VEAANLAANK QPFEVVYYPR 300 ASTPEFCVKA SLVETALQIR WCSGIRFKMA FETEDSSRIS WFMGTISLVQ VADPLNWPNS 360 PWRLLQVTWD EPDLLQNVRR VSPWLVELVS NMPAIHLSPF SPPRKKLRLP QHLDFPMDGQ 420 IPLQTFPGNL LGPSNTNQFG CLPESTPAGM QGARHAHYGL SLTDLHLNKL QSGLFPAGFP 480 SLDHAATPPM RVYNNLTLQK PSMSENVSCL LSMANSTQSS KKLDDEKTPQ LVLFGQKILT 540 EQQISLSSSG DTFSPVLTRN CSSDGNADKV TNFSDGSGSA LHQQGRSSCE RFQWYRDNHQ 600 ETEASLETGH CKVFLESEDV GRTMDLSLLR SYDELYRKLA DMFGIEKSEM LSQVLYRNIT 660 GAVKHIGDEP FSDFTRTARR LTILMDSGSN NVGV

Sequence ? help Back to Top

Protein Sequence Length: 694 aa Download sequence

MITFMDSKEK SKEVEKCLDP QLWHACAGGM VQMPAVNSKV YYFPQGHAEH ACGAVNFRNC  60
PKVPPLVPCR VSAVKFMADP ETDEVYAKLR LVPLNANDAD YDRDVVVGGE TQDKPASFAK  120
TLTQSDANNG GGFSVPRYCA ETIFPRLDYS ADPPVQNILA KDVHGETWKF RHIYRGTPRR  180
HLLTTGWSTF VNHKKLVAGD SIVFLRAENG DLCVGIRRAK KGIAGGPEAS SGWNPAGGNC  240
PMPYGSFSPF LREDDNRILR NGLNPSVGMM GRGKVRPEAV VEAANLAANK QPFEVVYYPR  300
ASTPEFCVKA SLVETALQIR WCSGIRFKMA FETEDSSRIS WFMGTISLVQ VADPLNWPNS  360
PWRLLQVTWD EPDLLQNVRR VSPWLVELVS NMPAIHLSPF SPPRKKLRLP QHLDFPMDGQ  420
IPLQTFPGNL LGPSNTNQFG CLPESTPAGM QGARHAHYGL SLTDLHLNKL QSGLFPAGFP  480
SLDHAATPPM RVYNNLTLQK PSMSENVSCL LSMANSTQSS KKLDDEKTPQ LVLFGQKILT  540
EQQISLSSSG DTFSPVLTRN CSSDGNADKV TNFSDGSGSA LHQQGRSSCE RFQWYRDNHQ  600
ETEASLETGH CKVFLESEDV GRTMDLSLLR SYDELYRKLA DMFGIEKSEM LSQVLYRNIT  660
GAVKHIGDEP FSDFTRTARR LTILMDSGSN NVGV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	0.0	ARF family protein