PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX71753.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

HD-ZIP

Protein Properties

Length: 947aa MW: 104762 Da PI: 6.9216

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX71753.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	57	3.3e-18	118	176	3	57
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 k ++t+eq+e+Le+l++ +++ps +r++L +++ +++ +q+kvWFqNrR +ek+ RDX71753.1 118 KYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECpilsHIEPKQIKVWFQNRRCREKQ 176 5679*****************************************************97 PP
2	START	168.4	4.8e-53	262	479	2	205
HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHH........HHHHHCCCGGCT-TT-SEEEEEEEECTT..EE CS START 2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlal........lveellddkeqWdetlakaetlevissg..ga 90 +aee+++e+++ka+ ++ Wv+++ +++g++++ +++ s++++g a+ra+g+v ++++ v+e+l+d++ W ++++++++l+v+ ++ g+ RDX71753.1 262 IAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPTRscgqtysfQVAEILKDRPLWFRDCRAVDVLNVLPTAngGT 360 7899************************************************99986344444445899999999************9999 PP EEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS START 91 lqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185 ++l +++l+a+++l+p Rdf+ +Ry+ l++g++vi+++S+ ++q+ p+ +++vRae+lpSg+li+p+++g+s +++v+h+dl+ ++++++lr+l+ RDX71753.1 361 IELLYMQLYAPTTLAPaRDFWLLRYTSVLEDGSLVICERSLKNTQNGPSmpsVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLY 459 **********************************************9888899**************************************** PP HHHHHHHHHHHHHHTXXXXX CS START 186 ksglaegaktwvatlqrqce 205 +s+++ ++kt++a+l+++++ RDX71753.1 460 ESSTVLAQKTTMAALRHLRQ 479 *************99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 947 aa Download sequence
MIGQKNFTIR DRYCDCNAEQ LNKRQKDKVK EKRQVASGAA GEGSKSVCQE SLKRCLAESI 60 PIRWSRWRTE IGEAAWFDPD RRRFLSLGVV VVESESRISE GLAMSCKDGS KNGMDNGKYV 120 RYTPEQVEAL ERLYHDCPKP SSIRRQQLIR ECPILSHIEP KQIKVWFQNR RCREKQRKES 180 SRLQTVNRKL TAMNKLLMEE NDRLQKQVSQ LVYENGYLRQ HTQNTTQATK DTSCESAVTS 240 GQHSLTTQHP PRDASPAGLL SIAEETLAEF LSKATGTAVE WVQMPGMKPG PDSIGIVAIS 300 HGCTGVAARA CGLVGLEPTR SCGQTYSFQV AEILKDRPLW FRDCRAVDVL NVLPTANGGT 360 IELLYMQLYA PTTLAPARDF WLLRYTSVLE DGSLVICERS LKNTQNGPSM PSVQHFVRAE 420 MLPSGYLIRP CEGGGSIIHI VDHMDLEPWS VPEVLRPLYE SSTVLAQKTT MAALRHLRQI 480 SHEVSQSNVT GWGRRPAALR ALSQRLSRGF NEALNGFTDE GWTTIGNDGV DDVTILVNSS 540 PDKLMGLNLS FANGFPSVSN AVLCAKASML LQNVPPAILL RFLREHRSEW ADNNMDAYTA 600 AAIKVGPCSL SGSRVGNYGG QVILPLAHTI EHEEFLEVIK LEGIAHSPEE AIMPREMFLL 660 QLCSGMDENA VGTCAELISA PIDASFADDA PLLPSGFRII PLESGKEASS PNRTLDLASA 720 LDVGPSGNRA SNEYAGNASC LRSVMTIAFE FAFESHMQEH VASMARQYVR SIISSVQRVA 780 LALSPSHLSS HAGLRTPLGT PEAQTLAHWI CNSYRCYLGV ELLKSNTEGN ESLLKSLWHH 840 SDAILCCTLK ALPVFTFSNQ AGLDMLETTL VALQDITLEK IFDDHGRKIL FSEFPQIIQQ 900 GFACLQGGIC VSSMGRPVSY ERVVAWKVLN EEENAHCEGK RIELNRT

Sequence ? help Back to Top

Protein Sequence Length: 947 aa Download sequence

MIGQKNFTIR DRYCDCNAEQ LNKRQKDKVK EKRQVASGAA GEGSKSVCQE SLKRCLAESI  60
PIRWSRWRTE IGEAAWFDPD RRRFLSLGVV VVESESRISE GLAMSCKDGS KNGMDNGKYV  120
RYTPEQVEAL ERLYHDCPKP SSIRRQQLIR ECPILSHIEP KQIKVWFQNR RCREKQRKES  180
SRLQTVNRKL TAMNKLLMEE NDRLQKQVSQ LVYENGYLRQ HTQNTTQATK DTSCESAVTS  240
GQHSLTTQHP PRDASPAGLL SIAEETLAEF LSKATGTAVE WVQMPGMKPG PDSIGIVAIS  300
HGCTGVAARA CGLVGLEPTR SCGQTYSFQV AEILKDRPLW FRDCRAVDVL NVLPTANGGT  360
IELLYMQLYA PTTLAPARDF WLLRYTSVLE DGSLVICERS LKNTQNGPSM PSVQHFVRAE  420
MLPSGYLIRP CEGGGSIIHI VDHMDLEPWS VPEVLRPLYE SSTVLAQKTT MAALRHLRQI  480
SHEVSQSNVT GWGRRPAALR ALSQRLSRGF NEALNGFTDE GWTTIGNDGV DDVTILVNSS  540
PDKLMGLNLS FANGFPSVSN AVLCAKASML LQNVPPAILL RFLREHRSEW ADNNMDAYTA  600
AAIKVGPCSL SGSRVGNYGG QVILPLAHTI EHEEFLEVIK LEGIAHSPEE AIMPREMFLL  660
QLCSGMDENA VGTCAELISA PIDASFADDA PLLPSGFRII PLESGKEASS PNRTLDLASA  720
LDVGPSGNRA SNEYAGNASC LRSVMTIAFE FAFESHMQEH VASMARQYVR SIISSVQRVA  780
LALSPSHLSS HAGLRTPLGT PEAQTLAHWI CNSYRCYLGV ELLKSNTEGN ESLLKSLWHH  840
SDAILCCTLK ALPVFTFSNQ AGLDMLETTL VALQDITLEK IFDDHGRKIL FSEFPQIIQQ  900
GFACLQGGIC VSSMGRPVSY ERVVAWKVLN EEENAHCEGK RIELNRT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	50	55	ESLKRC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52150.1	0.0	HD-ZIP family protein