PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX71738.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | MYB_related | ||||||||
Protein Properties | Length: 152aa MW: 17177.3 Da PI: 10.1356 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 24.3 | 7.3e-08 | 2 | 25 | 20 | 45 |
TTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 20 GggtWktIartmgkgRtlkqcksrwq 45 G++ W Ia++++ gR+++ +k++w+ RDX71738.1 2 GNR-WCEIAKRIP-GRSENAIKNHWN 25 888.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 152 aa Download sequence |
MGNRWCEIAK RIPGRSENAI KNHWNATKRR QNSKRKNKTK SSNGKPHSSI LEDYIRSKTQ 60 ISTTSINPTP TITTASHTTL SQDNAANPLN PVFYEPFANE PLFMQQIFMD NQSQISLGNV 120 EASKHSKMSP TSYLDYCHTN VDDVVVNIRV VV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18770.1 | 1e-12 | MYB family protein |