PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX70707.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB

Protein Properties

Length: 461aa MW: 51862.2 Da PI: 8.1193

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX70707.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.9	2e-17	137	183	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W+ eEd +l+++vkq+G + W+ Ia+ + gR +kqc++rw+++l RDX70707.1 137 KGQWSDEEDRKLLKLVKQHGVRKWSQIAENLD-GRAGKQCRERWHNHL 183 799***************************.***********97 PP
2	Myb_DNA-binding	51.2	2.9e-16	189	231	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++W++eE+ +lv+ +++ G++ W+ Ia++++ gRt++ +k++w+ RDX70707.1 189 KDSWSEEEERILVESHAKIGNR-WAEIAKRIP-GRTENAIKNHWN 231 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 461 aa Download sequence
MKGIGGGGAI IPLHGCGNIR VSNPTMCSAG PPLTAIDRFL WGQQSHFHKQ QPHNVADHSH 60 AGVLDGFVAS SGGSAYKFLW PNGTHHQVSF IEQIFANEEA LNWTQQACLK EDVHVLGKIV 120 KGVGRRPNKG SSVPLIKGQW SDEEDRKLLK LVKQHGVRKW SQIAENLDGR AGKQCRERWH 180 NHLRPDIKKD SWSEEEERIL VESHAKIGNR WAEIAKRIPG RTENAIKNHW NATKRRQNSR 240 RKNKRAGTLN GKPLSSILQD YIRDLTLPNT TKTTTPSVEP IVAPTKHHLA LPQLSDSLTN 300 DNSSSPPLMP QSYDDEMLFM QQLFKENCVN VESLKHSKNS NNNNSSTSLD CYYHHQASNN 360 DQLLTDVTQC GFVHSNTNSH NNNMCLDESL FISRKTPSTP INYLDYDLCL SHLLNGTAGS 420 SLCYNYEGNR DCCEGKREMN MIELVCSTKC LQQQDESEEL R

Sequence ? help Back to Top

Protein Sequence Length: 461 aa Download sequence

MKGIGGGGAI IPLHGCGNIR VSNPTMCSAG PPLTAIDRFL WGQQSHFHKQ QPHNVADHSH  60
AGVLDGFVAS SGGSAYKFLW PNGTHHQVSF IEQIFANEEA LNWTQQACLK EDVHVLGKIV  120
KGVGRRPNKG SSVPLIKGQW SDEEDRKLLK LVKQHGVRKW SQIAENLDGR AGKQCRERWH  180
NHLRPDIKKD SWSEEEERIL VESHAKIGNR WAEIAKRIPG RTENAIKNHW NATKRRQNSR  240
RKNKRAGTLN GKPLSSILQD YIRDLTLPNT TKTTTPSVEP IVAPTKHHLA LPQLSDSLTN  300
DNSSSPPLMP QSYDDEMLFM QQLFKENCVN VESLKHSKNS NNNNSSTSLD CYYHHQASNN  360
DQLLTDVTQC GFVHSNTNSH NNNMCLDESL FISRKTPSTP INYLDYDLCL SHLLNGTAGS  420
SLCYNYEGNR DCCEGKREMN MIELVCSTKC LQQQDESEEL R

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	234	245	KRRQNSRRKNKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58850.1	5e-61	MYB family protein