PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX70681.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | NF-YC | ||||||||
Protein Properties | Length: 168aa MW: 18842.2 Da PI: 10.1756 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 36.7 | 9.4e-12 | 67 | 151 | 15 | 99 |
NF-YC 15 dfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprd 99 + k + +P+ ri+ ++k ++ ++s ea + +a e f+ ++t ++ + + ++++l +a++v++ +dfl d vp++ RDX70681.1 67 EAKTNVFPMNRIRTMIKGEDPDLRVSQEALLAINNAAEKFLEQFTQDAYACSVQDRKKSLSYKHLANVVSKQRRYDFLSDFVPEK 151 668889**********976655679*********************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 168 aa Download sequence |
MASSHTPKSE KKKTKNGEIS KSESKAKKDK DIEKEENKKN KKLKLSNGNS KRQDEGFEKG 60 AEGGGEEAKT NVFPMNRIRT MIKGEDPDLR VSQEALLAIN NAAEKFLEQF TQDAYACSVQ 120 DRKKSLSYKH LANVVSKQRR YDFLSDFVPE KVKAEDALRE RSSAGKGG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07980.1 | 6e-28 | NF-YC family protein |