PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX70677.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

HD-ZIP

Protein Properties

Length: 273aa MW: 30960.9 Da PI: 8.2006

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX70677.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	62.2	7.8e-20	124	178	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +k+ +++k+q +Le+ F+ ++++s ++++eLAkkl+L +rqV vWFqNrRa+ k RDX70677.1 124 KKKLRLSKQQSAVLEDSFKDHSTLSPKQKQELAKKLNLRTRQVEVWFQNRRARTK 178 788899***********************************************98 PP
2	HD-ZIP_I/II	115.6	2.9e-37	124	213	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rlsk+q+++LE+sF+ +++L+p++K+ela++L+l++rqv+vWFqnrRARtk+kq+E+++e Lk+++++l+een++L+ke +eL+ ++ RDX70677.1 124 KKKLRLSKQQSAVLEDSFKDHSTLSPKQKQELAKKLNLRTRQVEVWFQNRRARTKLKQTEVECELLKKWCETLTEENKMLQKELQELK-SM 213 59*************************************************************************************9.44 PP

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence
MGFDISILGL GLGLGLGLHD QSSENCMNSN EPRQKKKDAN QCNKAYPSLT LGPPDDNQQI 60 KKTESDEYYY YLHPHASSPS AVSSFSNSYS IKRERDQFAG EEIELEVEKI LSRVVDVDEN 120 GNPKKKLRLS KQQSAVLEDS FKDHSTLSPK QKQELAKKLN LRTRQVEVWF QNRRARTKLK 180 QTEVECELLK KWCETLTEEN KMLQKELQEL KSMKETVGPF YMQVPVASLT ICPSCERICG 240 GSGTTNNGSS PTTKPHHHFY KNNYTFTQSS AAC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	173	181	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06710.1	1e-59	HD-ZIP family protein