PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RDX70402.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
|
||||||||
Family | WOX | ||||||||
Protein Properties | Length: 171aa MW: 19779.2 Da PI: 8.3295 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 65.7 | 6.2e-21 | 23 | 84 | 1 | 57 |
TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++ R+++t+eq+++L elF + r+p+++++++++++l +++ ++V++WFqN++a+e++ RDX70402.1 23 KCGRWNPTTEQVKVLTELFSSgLRTPTTDQIQKISNQLsfygKIESKNVFYWFQNHKARERQ 84 568*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 114.3 | 6.3e-37 | 23 | 86 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++ RW+Pt+eQ+k+L+el++sGlrtP++++iq+i+++L+ yGkie+kNVfyWFQN+kaRerqk+ RDX70402.1 23 KCGRWNPTTEQVKVLTELFSSGLRTPTTDQIQKISNQLSFYGKIESKNVFYWFQNHKARERQKR 86 678***********************************************************95 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 171 aa Download sequence |
MEEDTMSGFC FRGASVGGNS GTKCGRWNPT TEQVKVLTEL FSSGLRTPTT DQIQKISNQL 60 SFYGKIESKN VFYWFQNHKA RERQKRRKVD IHRQNSISVN SFTQNFTQLY EVSQPERVIE 120 TLQLFPLNSF GESESKNMRV HASECCRDNT MFSYTVGEQM DHPPLDLRLS F |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G11260.1 | 9e-61 | WOX family protein |