PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX70080.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | GATA | ||||||||
Protein Properties | Length: 225aa MW: 25385 Da PI: 7.5778 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 58.1 | 1.2e-18 | 137 | 171 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 Cs+C + kTp+WR+gp g+ktLCnaCG+++++ +l RDX70080.1 137 CSHCASEKTPQWRSGPMGPKTLCNACGVRFKSGRL 171 *******************************9885 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence |
MDMYGSFFTS YDCLLTDGFL DFSNITTDTH YHRLPPPQNP PFSHDPNFFF NFPSIPSHEA 60 AELEWLSQFV DDNATSFHDF PPSVSTGSNT TPFLANNNNN HSNDNDNNDP KASSLVAGKS 120 RARREGSAAG DGGARRCSHC ASEKTPQWRS GPMGPKTLCN ACGVRFKSGR LVPEYRPAAS 180 PTFVLTQHSN SHRKVMELRR QKELLRQQQQ QQEQCYRHTH DFKVC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45050.1 | 1e-49 | GATA family protein |