PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX69619.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | NF-YB | ||||||||
Protein Properties | Length: 145aa MW: 15905.8 Da PI: 5.4409 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 40.2 | 8.2e-13 | 5 | 99 | 6 | 95 |
NF-YB 6 rflPianvsrimkkvlP...ana..kiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 ++lP a v ++k l +++ +skd e + fi ++++ a+d c++ kr+ in++d++ al + f ++v plk+ l+++r+ ++ RDX69619.1 5 EELPRAIVRHVVKDKLSrcsEDGdiSVSKDGLLAFSESARIFIHYLSATANDICKESKRQIINAEDVFKALEETEFPEFVRPLKASLEEFRKKNA 99 578888888888888752223441146788888899*******************************************************8765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 145 aa Download sequence |
MAEAEELPRA IVRHVVKDKL SRCSEDGDIS VSKDGLLAFS ESARIFIHYL SATANDICKE 60 SKRQIINAED VFKALEETEF PEFVRPLKAS LEEFRKKNAG KKATVSKGKE EGAKKKRKLE 120 GESSDKGDGS DKGDDTDKGE GGDGQ |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 95 | 117 | RKKNAGKKATVSKGKEEGAKKKR |
2 | 114 | 119 | KKKRKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G27470.1 | 2e-40 | NF-YB family protein |