PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX68914.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family ARF
Protein Properties Length: 1007aa    MW: 110890 Da    PI: 6.8428
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX68914.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B371.51e-22136237199
                 EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                 f+k+lt sd++++g +++p++ a+++      +++++  ++l+ +d++ ++W++++iyr++++r++lt+GW+ Fv+ ++L +gD+v+F   ++++++l+
  RDX68914.1 136 FCKQLTASDTSTHGGFSVPRRAADKMfpsldySLQPPA-QELVARDLHDNVWRFRHIYRGQPKRHLLTTGWSLFVSGKRLLAGDSVLFV--RDEKQQLL 231
                 99*****************************9777766.49************************************************..5688889* PP

                 EEEE-S CS
          B3  94 vkvfrk 99 
                 ++++r+
  RDX68914.1 232 LGIRRA 237
                 ***997 PP

2Auxin_resp116.72e-38263346183
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                 aaha++++s F+v+YnPras+seFv++++k+ ka++ +++s+GmRf+m+feteds +rr++Gt++gvsdld+vrW+nS Wr+L+
  RDX68914.1 263 AAHAVANNSSFTVFYNPRASPSEFVIPLAKYYKAVYsHHISPGMRFRMMFETEDSGTRRYMGTIIGVSDLDSVRWKNSLWRNLQ 346
                 79********************************99899*******************************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 1007 aa     Download sequence    
MATIAMKTQP DGAGAAVPNV GEGGEKKSIN PELWQACAGP LLNLPSPGTH VVYFPQGHSE  60
QVAASLKKDV DAQIPNYTNL PSKIPCLLHN VTLHADPDTD EVYAQMTLQP VPSFDTDALL  120
RSDISLRSSK PQPEFFCKQL TASDTSTHGG FSVPRRAADK MFPSLDYSLQ PPAQELVARD  180
LHDNVWRFRH IYRGQPKRHL LTTGWSLFVS GKRLLAGDSV LFVRDEKQQL LLGIRRANKR  240
QPSNISSSVL SSDSMHIGVL AAAAHAVANN SSFTVFYNPR ASPSEFVIPL AKYYKAVYSH  300
HISPGMRFRM MFETEDSGTR RYMGTIIGVS DLDSVRWKNS LWRNLQVGWD ESIAEERRSR  360
VSVWEIEPVT APYFICPPPF FRSKRPRLPG MPDDESDFNN LFKSAVPWLG DDMCIKDPQA  420
LPGLSLVQWM NIQQNPALAS SVQPNYVPSM SGLILQNHPG ADITNQLGFS TPQISQSNDV  480
SVNAQNILQT SQQLDHIQKL PSTSSALGMV TQPLQQLGDI TQQPRNMTNQ TLPQNQVHTQ  540
LLNPQSLVLT NNFLQQQQSS IQNHQLHRSL SQNPPQKHQQ TTMGQNQRPN SFQSPMPDHL  600
NQQLQMSDNQ VRLQLLQQLQ QQQQTLLAQQ SALHQPAQIQ IQDQQRQLLD VAHNSSALTA  660
GQVPEIPPML QNSIPEANSI IHQIKMPTGQ KNIQFSHLSQ QPALLSEMSG RVGLPPTVTT  720
NPLSASAGSI LTGAGQSVIT DDAPSCSTSP STNNCVTALP PVISSQIPRS TTIGDDMAQS  780
AVTILSPSAL ETMSSNATLV NDVQPKYEVK PLNISKNQNQ GIVAPQTYLN GVVVQADYLD  840
SSSSTTSLCH FQSDTHMHQN NSPFSYNPQL MYCRDNSQNV EVQADARSNV PFGNNINGQM  900
GMPLNLDSLL TKGTVGLGKD LSNNFPSGGL LGDYENNRNV QPELSTSMVS QTFEVPDMTF  960
NSIDSTINGS SFLNRSPWDL PPPPPPPLPP PPPQQQQLQR MRTYTKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19220.10.0ARF family protein