PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX68471.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB

Protein Properties

Length: 279aa MW: 32797 Da PI: 7.9657

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX68471.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.8	1.1e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd++l+ +v+++G +W+ I++ g+ R++k+c++rw++yl RDX68471.1 14 KGTWTPEEDQKLITYVTRYGHWNWNQIPKFAGLERCGKSCRLRWLNYL 61 799***************99**********************97 PP
2	Myb_DNA-binding	47.4	4.5e-15	67	142	1	47
TSSS-HHHHHHHHHHHHHTTTT..............................-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..............................tWktIartmgkgRtlkqcksrwqky 47 rg+ T+eEde ++++ ++lG++ W+ Ia+ ++ gRt++++k++w++ RDX68471.1 67 RGNYTQEEDETIIKLLQRLGNRymklrnailcrnssnrvtrvynakhyqtstKWSVIAAQLP-GRTDNDLKNYWHTN 142 899*********************************************************.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence
MLKNTCTVKS RLRKGTWTPE EDQKLITYVT RYGHWNWNQI PKFAGLERCG KSCRLRWLNY 60 LRPNIKRGNY TQEEDETIIK LLQRLGNRYM KLRNAILCRN SSNRVTRVYN AKHYQTSTKW 120 SVIAAQLPGR TDNDLKNYWH TNLKKRYQQN SEKCVKNQVS ESKDQFPVPV EVLMPNNDGP 180 FQNLPATSQS TEFSIIPDCI AANSKENFDP EDEFAFVYGY QEPMNESFWL ELEPYVADIS 240 CVPFEILAPE SDSFSPVRDV ELWSHDNEYY ACLTVEKKY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79180.1	6e-49	MYB family protein