PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX67432.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | C2H2 | ||||||||
Protein Properties | Length: 226aa MW: 25310.8 Da PI: 8.8291 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.1 | 3.1e-05 | 61 | 83 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C k F++ L H+++H RDX67432.1 61 YTCSFCRKEFKSAQALGGHMNVH 83 9********************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 226 aa Download sequence |
MKRSSLMSCA NKTLTKDSIH VVTNKNNQMA KEFWECSNNN NNSHNADQDY VNGFPWPPRS 60 YTCSFCRKEF KSAQALGGHM NVHRRDRARL RQSPPTEPHQ GPIPMLNLNL DPTTTTNPNI 120 NSTTLLPSSS SPLKPVTCTL PLFVSPTPPS PSSELKTWVV MDGILLNNPF STKSTPEHSK 180 SRTPEDGCKV LKKGEILRMD LEIGLPRDYD LDLELRLGEK LPLIIS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23130.1 | 2e-30 | C2H2 family protein |