PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX67368.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

ARF

Protein Properties

Length: 937aa MW: 104400 Da PI: 6.1049

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX67368.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	55.4	1.1e-17	147	227	1	76
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--T CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLke 76 f+k+lt sd++++g +++p++ ae+ +++++ ++l+++d++ ++W++++iyr++++r++lt+GW+ Fv +++L++ RDX67368.1 147 FCKTLTASDTSTHGGFSVPRRAAEKLfppldyTIQPPT-QELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRA 227 99*******************999*9555555.49*************************************86 PP
2	Auxin_resp	115.4	5.1e-38	286	369	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaas++s+F+++YnPra++seFvv+++k++ka+ ++vsvGmRf m+fete+s +rr++Gt+vg+sd+dp+rWp+SkWr+++ RDX67368.1 286 AAHAASNRSPFTIFYNPRACPSEFVVPLAKYRKAVFgTQVSVGMRFGMMFETEESGKRRYMGTIVGISDVDPLRWPGSKWRNIQ 369 79******************************988******************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 937 aa Download sequence
MASVEEKIKT GGGMVVGGQT LAAEMKLLKE MQEHSGVRKT LNSELWHACA GPLVSLPQVG 60 SLVFYFPQGH SEQVAASTRR TATSQIPNYP NLPSQLLCQV QNVTLHADKE TDEIYAQMTL 120 QTLNSEKEVF PISDFGLKHS KHPSEFFCKT LTASDTSTHG GFSVPRRAAE KLFPPLDYTI 180 QPPTQELVVR DLHDNTWTFR HIYRGQPKRH LLTTGWSLFV GSKRLRAVHT EYRCITFFIL 240 KMMSIATRDE KSQLRVGVRR VNRQQTTLPS SVLSADSMHI GVLAAAAHAA SNRSPFTIFY 300 NPRACPSEFV VPLAKYRKAV FGTQVSVGMR FGMMFETEES GKRRYMGTIV GISDVDPLRW 360 PGSKWRNIQV EWDEPGCGDK QNRVSVWEIE TPESLFIFPS LTSSLKRPLQ SGLLENEWGT 420 LLRRPFVRVP ENGTMDLSNS MPNLYSEHLM KMLFKPQLMN TNGAFLSTMQ QESAATRAPL 480 QDNLKAHLAS AENMLLKNLH CQSIPDQPNS LNMQSLLKSD QPDKFHPLAK VDNHHPSGVV 540 TDKLKLESEV LPDHIIDYPS MEGCNIEKMA ANSVNQPGLP NQLTFHNQNQ SPLLNQYSAW 600 PMQPQLESSV PHPQMIDMAQ ADSAMVNGLL PQLDIDEWMA YASSQPFAGQ NRPTGPLSDL 660 QEHTSLQPQV VNPPLPSMNH EVWDHYVKNL KFLSQADQLT SICQPGLYNG ISSSNSLRDL 720 SAESNNQSEI CVNVDVSNSV GTTMVDPSTS STILDEFCTM KDREFQTPQD CMVGNLSSSQ 780 DVQSQITSAS LAESHAFSLR DNSGGTSSSH VDFDESSFLQ NNSWQQVPAP IRTYTKVQKA 840 GSVGRSIDVT TFKNYEELIR AIECMFGLDG LLNDTKGSGW KLVYVDYESD VLLVGDDPWE 900 EFVGCVRCIR ILSPSEVQQM SEEGMKLLNS GALQGMN

Sequence ? help Back to Top

Protein Sequence Length: 937 aa Download sequence

MASVEEKIKT GGGMVVGGQT LAAEMKLLKE MQEHSGVRKT LNSELWHACA GPLVSLPQVG  60
SLVFYFPQGH SEQVAASTRR TATSQIPNYP NLPSQLLCQV QNVTLHADKE TDEIYAQMTL  120
QTLNSEKEVF PISDFGLKHS KHPSEFFCKT LTASDTSTHG GFSVPRRAAE KLFPPLDYTI  180
QPPTQELVVR DLHDNTWTFR HIYRGQPKRH LLTTGWSLFV GSKRLRAVHT EYRCITFFIL  240
KMMSIATRDE KSQLRVGVRR VNRQQTTLPS SVLSADSMHI GVLAAAAHAA SNRSPFTIFY  300
NPRACPSEFV VPLAKYRKAV FGTQVSVGMR FGMMFETEES GKRRYMGTIV GISDVDPLRW  360
PGSKWRNIQV EWDEPGCGDK QNRVSVWEIE TPESLFIFPS LTSSLKRPLQ SGLLENEWGT  420
LLRRPFVRVP ENGTMDLSNS MPNLYSEHLM KMLFKPQLMN TNGAFLSTMQ QESAATRAPL  480
QDNLKAHLAS AENMLLKNLH CQSIPDQPNS LNMQSLLKSD QPDKFHPLAK VDNHHPSGVV  540
TDKLKLESEV LPDHIIDYPS MEGCNIEKMA ANSVNQPGLP NQLTFHNQNQ SPLLNQYSAW  600
PMQPQLESSV PHPQMIDMAQ ADSAMVNGLL PQLDIDEWMA YASSQPFAGQ NRPTGPLSDL  660
QEHTSLQPQV VNPPLPSMNH EVWDHYVKNL KFLSQADQLT SICQPGLYNG ISSSNSLRDL  720
SAESNNQSEI CVNVDVSNSV GTTMVDPSTS STILDEFCTM KDREFQTPQD CMVGNLSSSQ  780
DVQSQITSAS LAESHAFSLR DNSGGTSSSH VDFDESSFLQ NNSWQQVPAP IRTYTKVQKA  840
GSVGRSIDVT TFKNYEELIR AIECMFGLDG LLNDTKGSGW KLVYVDYESD VLLVGDDPWE  900
EFVGCVRCIR ILSPSEVQQM SEEGMKLLNS GALQGMN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19850.1	0.0	ARF family protein