PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX67359.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | GATA | ||||||||
Protein Properties | Length: 220aa MW: 25570.8 Da PI: 9.4951 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 54.8 | 1.3e-17 | 157 | 190 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 Cs+C +++Tp+WR gp g tLCnaCG++y++ + RDX67359.1 157 CSHCDVSTTPQWRAGPLGRNTLCNACGMRYKSGR 190 *******************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
MTSANYDEDD YQIFNFDETI LSPNIDEFLE DPLCVPRDAL ESLERINFWE DKDSNSIVMF 60 SNTSEKEKVK LERSEKVKLE RLEKEKPEKK SFTNASTIQN NHGCTREPKN LSNITKKSRS 120 KILRATCISS RSSSKWKIDF QNSKQNSSIA KFCHRRCSHC DVSTTPQWRA GPLGRNTLCN 180 ACGMRYKSGR LFPEYRPAKS PTFDDSKHSN FHRKIIRMRA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66320.2 | 9e-32 | GATA family protein |