PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX66920.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

ARF

Protein Properties

Length: 694aa MW: 76560.7 Da PI: 7.6903

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX66920.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	74.8	1e-23	105	206	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f k+lt+sd+++ g +++p+ +ae++ +++ + t+ +d +g++W++++iyr++++r++lt+GW++Fv++++L +gD vvF + +++ l RDX66920.1 105 FAKTLTQSDANNGGGFSVPRYCAETIfprldysAEPPVQ--TVAAKDVHGEVWKFRHIYRGTPRRHLLTTGWSSFVNQKKLVAGDAVVFL--RAENGDL 199 89**************************986545444..8********************************************..4488999 PP EEEEE-S CS B3 93 vvkvfrk 99 +v+++r+ RDX66920.1 200 CVGIRRA 206 **997 PP
2	Auxin_resp	117	1.6e-38	270	353	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 a++ a+++++FevvY+Prast+eF++kv++v+ a++++++ GmRfkmafetedss++++ +Gt+++v+ +dp+rWpnS+Wr+L+ RDX66920.1 270 AVTLAASNKPFEVVYYPRASTPEFCIKVSSVRGAMRIQWCSGMRFKMAFETEDSSRISWfMGTIASVQVVDPIRWPNSPWRLLQ 353 678899****************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 694 aa Download sequence
MKEGEKLLDP QLWHACAGGM VQMPLVNSKV FYFPQGHAEH AHTTVDLRVP PLIPCTVAAV 60 KFMADPDTDE VFAKLSLVPV GNSELGRDTD GGDDVTEPSE KPASFAKTLT QSDANNGGGF 120 SVPRYCAETI FPRLDYSAEP PVQTVAAKDV HGEVWKFRHI YRGTPRRHLL TTGWSSFVNQ 180 KKLVAGDAVV FLRAENGDLC VGIRRAKKGI GGCEASSVWN SASGSGNCGI GPYGPFSFFL 240 REENKQHLRS GSGSSQVPRV RVRPESVTEA VTLAASNKPF EVVYYPRAST PEFCIKVSSV 300 RGAMRIQWCS GMRFKMAFET EDSSRISWFM GTIASVQVVD PIRWPNSPWR LLQVTWDEPD 360 LLQNVKRVSP WLVELVSSMP VINFTPFSPP RKKPRFPQHP DFPLDVQFPI PTFSGNQLGP 420 NSPLCGFSDN APASIQGARH AQIGISLSDL DLNNKLQLGL LPTNIQQLEV FSGISNGNMT 480 NHDKSKESLS CLLTMGKSSK SLEKSDDVKK HQFLLFGQPI LTEQQISRSC STDVLSRGKN 540 SLNDDKDKEK CVLDDSQSAL SQQFSPGKSS ADEFSWQLGL DTGHCKVFLE SEDVGRTLDL 600 SHLGSYEELY RRLGNMFGIE RSEIFNRVLY RDATGSVKQT GEEPFSDFMK TAKRLTILTD 660 SGSKNIKRVW ITGTRNGEHG LDASNKTGPL SIFA

Sequence ? help Back to Top

Protein Sequence Length: 694 aa Download sequence

MKEGEKLLDP QLWHACAGGM VQMPLVNSKV FYFPQGHAEH AHTTVDLRVP PLIPCTVAAV  60
KFMADPDTDE VFAKLSLVPV GNSELGRDTD GGDDVTEPSE KPASFAKTLT QSDANNGGGF  120
SVPRYCAETI FPRLDYSAEP PVQTVAAKDV HGEVWKFRHI YRGTPRRHLL TTGWSSFVNQ  180
KKLVAGDAVV FLRAENGDLC VGIRRAKKGI GGCEASSVWN SASGSGNCGI GPYGPFSFFL  240
REENKQHLRS GSGSSQVPRV RVRPESVTEA VTLAASNKPF EVVYYPRAST PEFCIKVSSV  300
RGAMRIQWCS GMRFKMAFET EDSSRISWFM GTIASVQVVD PIRWPNSPWR LLQVTWDEPD  360
LLQNVKRVSP WLVELVSSMP VINFTPFSPP RKKPRFPQHP DFPLDVQFPI PTFSGNQLGP  420
NSPLCGFSDN APASIQGARH AQIGISLSDL DLNNKLQLGL LPTNIQQLEV FSGISNGNMT  480
NHDKSKESLS CLLTMGKSSK SLEKSDDVKK HQFLLFGQPI LTEQQISRSC STDVLSRGKN  540
SLNDDKDKEK CVLDDSQSAL SQQFSPGKSS ADEFSWQLGL DTGHCKVFLE SEDVGRTLDL  600
SHLGSYEELY RRLGNMFGIE RSEIFNRVLY RDATGSVKQT GEEPFSDFMK TAKRLTILTD  660
SGSKNIKRVW ITGTRNGEHG LDASNKTGPL SIFA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28350.1	0.0	ARF family protein