PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX65885.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | Whirly | ||||||||
Protein Properties | Length: 245aa MW: 27395.4 Da PI: 10.3983 | ||||||||
Description | Whirly family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Whirly | 181.3 | 1.8e-56 | 71 | 205 | 3 | 137 |
Whirly 3 yktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalkvePlpd 101 +kaa+++ + +ptf++ldsg+++++r+G++++ ++ +++erkydWek+q+falsatev++l+ +++++sceffhdp++ +sn+G+vrk+l+++P+++ RDX65885.1 71 TNGKAAFSLSPCLPTFTKLDSGTVVVDRRGSMMMIFMHSIGERKYDWEKRQRFALSATEVGSLITMGPQDSCEFFHDPSMLSSNAGQVRKSLSIKPHTN 169 579************************************************************************************************ PP Whirly 102 GsGlfvnlsvtnslvkgnesfsvPvskaefavlrsl 137 G+fv+l+v n+l++++++f+vPv+ aef+v++++ RDX65885.1 170 NNGYFVSLTVVNNLLNTKDHFTVPVTTAEFSVMKTA 205 **********************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
VTASFHERRE ERNRASRVKR KEKMLKLSRV LPLTSTSRHQ LLEVLSFRNA EAAISTATNN 60 YAAKGIALYI TNGKAAFSLS PCLPTFTKLD SGTVVVDRRG SMMMIFMHSI GERKYDWEKR 120 QRFALSATEV GSLITMGPQD SCEFFHDPSM LSSNAGQVRK SLSIKPHTNN NGYFVSLTVV 180 NNLLNTKDHF TVPVTTAEFS VMKTACSFAL PRIMGWDQIT NQQSRGTVGL QPKGGSQVLD 240 LEWEK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71260.1 | 3e-80 | Whirly family protein |