PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX65860.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

GATA

Protein Properties

Length: 544aa MW: 60297.9 Da PI: 6.7377

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX65860.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	49.9	4.3e-16	7	41	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C +Cg+t+TplWR+gp ++ LCnaCG ++r kg+ RDX65860.1 7 CYHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGT 41 **************88888*********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 544 aa Download sequence
MGKQGPCYHC GVTSTPLWRN GPPEKPVLCN ACGSRWRTKG TLANYTPLHA RAETDDYEDQ 60 RVSGVKSISI NKKKEVAFLK RKQNHDNVVF GGFAPDYNQG YHKVGDEDTS NRSSSGSAIS 120 NSESCAQFGG MDASDLTGPA QSVVWDTMVP SKKRTCVGRP KPSSVEKLTK DLCTILHEQQ 180 SYFSASSEDL LFESETPMVS VEIGHGSVLI RHPSYIAREE ESEASSLSVD NKQCPMSEAY 240 SYSGGILMHC DSSHLKSSSL EVEKIRNSTS QGMQQEQLRR HAFLPYDKSQ LERVQILRNH 300 ESPLCSIDLN DVVNYEEFLR ILTNEEQQQL LKFLPVVDTA KLPDSLKVMF NSSQFKESLT 360 YFQQLLVEGV FDISLLGAKP EDCKTLERLA LSNLSKSKWV EHYNFLKKCK NKAGKPDAMG 420 STGTASTNVA NSKAATNFAN IKRSRDSRNQ NFPELKTLMR SPKIMITKAI CEHKEGVEDG 480 ACYSPKSLFA LPPDTSSLML DSLNFVEDST DQDLLLEVPS NSSFPQAELL HPTLSLGAQA 540 STKT

Sequence ? help Back to Top

Protein Sequence Length: 544 aa Download sequence

MGKQGPCYHC GVTSTPLWRN GPPEKPVLCN ACGSRWRTKG TLANYTPLHA RAETDDYEDQ  60
RVSGVKSISI NKKKEVAFLK RKQNHDNVVF GGFAPDYNQG YHKVGDEDTS NRSSSGSAIS  120
NSESCAQFGG MDASDLTGPA QSVVWDTMVP SKKRTCVGRP KPSSVEKLTK DLCTILHEQQ  180
SYFSASSEDL LFESETPMVS VEIGHGSVLI RHPSYIAREE ESEASSLSVD NKQCPMSEAY  240
SYSGGILMHC DSSHLKSSSL EVEKIRNSTS QGMQQEQLRR HAFLPYDKSQ LERVQILRNH  300
ESPLCSIDLN DVVNYEEFLR ILTNEEQQQL LKFLPVVDTA KLPDSLKVMF NSSQFKESLT  360
YFQQLLVEGV FDISLLGAKP EDCKTLERLA LSNLSKSKWV EHYNFLKKCK NKAGKPDAMG  420
STGTASTNVA NSKAATNFAN IKRSRDSRNQ NFPELKTLMR SPKIMITKAI CEHKEGVEDG  480
ACYSPKSLFA LPPDTSSLML DSLNFVEDST DQDLLLEVPS NSSFPQAELL HPTLSLGAQA  540
STKT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17570.3	1e-150	GATA family protein