PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX65414.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

ARF

Protein Properties

Length: 1152aa MW: 127220 Da PI: 6.4768

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX65414.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	68.8	7.4e-22	167	268	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 f+k+lt sd++++g +++p++ a+++ +++++ ++l+ +d++ +W++++iyr++++r++lt+GW+ Fv+ ++L +gD+v+F ++++++l+ RDX65414.1 167 FCKQLTASDTSTHGGFSVPRRAADKIfptldySMQPPA-QELVARDLHDTVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFI--RDEKQQLL 262 99***************************9545444.38*********************************************..5688889 PP EEEE-S CS B3 94 vkvfrk 99 ++++r+ RDX65414.1 263 LGIRRA 268 ***997 PP
2	Auxin_resp	120.4	1.4e-39	293	376	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+++s+F+v+YnPras+seFv++++k+ ka++ ++ s+GmRf+m+feteds +rr++Gt++g+sdldpvrW+nS+Wr+L+ RDX65414.1 293 AAHAAANNSPFTVFYNPRASPSEFVIPLAKYYKAVYsHQPSLGMRFRMMFETEDSGTRRYMGTITGISDLDPVRWKNSQWRNLQ 376 79******************************9989******************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1152 aa Download sequence
MKPPAPQPQV QAEGASGAPK PCEVREVAEK KSINPELWQA CAGPLVNLPP SGTHVIYFPQ 60 GHSEQVAASL KKDVDAQIPN YPNLPSKLLC VLHNLTLHVL PHISLSFIEY TILPFSLLIS 120 PFLGQADPET DEVYAQMTLQ PVPSFDKDAL LRSDLALKST KPQPEFFCKQ LTASDTSTHG 180 GFSVPRRAAD KIFPTLDYSM QPPAQELVAR DLHDTVWTFR HIYRGQPKRH LLTTGWSLFV 240 SGKRLFAGDS VLFIRDEKQQ LLLGIRRANR QPTNISSSVL SSDSMHIGIL AAAAHAAANN 300 SPFTVFYNPR ASPSEFVIPL AKYYKAVYSH QPSLGMRFRM MFETEDSGTR RYMGTITGIS 360 DLDPVRWKNS QWRNLQVGWD ESTAGEKRSR VSIWEIEPVT APFFICPPPF FRSKRPRQPG 420 MPDDELSDFD NLFKRTMPWP GDDMCMKEPQ GLPGLSLAQW MNMQQSPALA SSLQPNYVPS 480 LPGSILQNIP GADISRQLGF SAPQISQSNN VAFNAQRLLQ TAQQLDHLQK LPSTSSTLGT 540 VLPLQQQLGD ITQQPRQNLV NQTNPQGQVQ AQPLHPQNIV QNNNNILQQQ QPSIQNHQLH 600 RSLSQNPSQQ QQQTITGQNQ QQNLIQPPMP DHVQQLLMSD NQIQLQLLHK LQQPKQTLLA 660 QQTALQQPTQ LTQIQDQQKQ LLDKTHNLSR ALTPGQVLEI PPVLQNSLPE ANSISNQMMK 720 ANCQNNIQFS QQPKLQQQQP GLLSEMSGHM AFLPTPTTNQ LSAAGSSILT GAAGAGQSVI 780 TDDVPSCSTS PSTNNCANAL PPLINSRFQR STIVGDDMAQ SAATIFTSSA LETMSSNANL 840 LKDLQPKSEV KPSLNISKNQ NQGHFGPQTY LNGSAAHTDC LDTSSSTTSV CLSQSDAHMH 900 QNNNPLSYNP QSMLFRDNSQ DGEVQADARS NIPYANNIDS QMGMPLNPDS FLTKGTLGLG 960 KDLCNNFSSE GLLGNYENNR DAQQELSSSM VSQTFGVPEM AFNSIDSTID DSNYLNRGTW 1020 APPPAPPPPP LPPAQLQRMR TYTKVYKRGA VGRSIDITRY SGYEELKQDL ARRFGIEGQL 1080 EDQQRIGWKL VYVDHESDVL LVGDDPWEEF VNCVRCIKIL SPQEVQQMSL DGDFGNGGLP 1140 NQACSSSDGG NT

Sequence ? help Back to Top

Protein Sequence Length: 1152 aa Download sequence

MKPPAPQPQV QAEGASGAPK PCEVREVAEK KSINPELWQA CAGPLVNLPP SGTHVIYFPQ  60
GHSEQVAASL KKDVDAQIPN YPNLPSKLLC VLHNLTLHVL PHISLSFIEY TILPFSLLIS  120
PFLGQADPET DEVYAQMTLQ PVPSFDKDAL LRSDLALKST KPQPEFFCKQ LTASDTSTHG  180
GFSVPRRAAD KIFPTLDYSM QPPAQELVAR DLHDTVWTFR HIYRGQPKRH LLTTGWSLFV  240
SGKRLFAGDS VLFIRDEKQQ LLLGIRRANR QPTNISSSVL SSDSMHIGIL AAAAHAAANN  300
SPFTVFYNPR ASPSEFVIPL AKYYKAVYSH QPSLGMRFRM MFETEDSGTR RYMGTITGIS  360
DLDPVRWKNS QWRNLQVGWD ESTAGEKRSR VSIWEIEPVT APFFICPPPF FRSKRPRQPG  420
MPDDELSDFD NLFKRTMPWP GDDMCMKEPQ GLPGLSLAQW MNMQQSPALA SSLQPNYVPS  480
LPGSILQNIP GADISRQLGF SAPQISQSNN VAFNAQRLLQ TAQQLDHLQK LPSTSSTLGT  540
VLPLQQQLGD ITQQPRQNLV NQTNPQGQVQ AQPLHPQNIV QNNNNILQQQ QPSIQNHQLH  600
RSLSQNPSQQ QQQTITGQNQ QQNLIQPPMP DHVQQLLMSD NQIQLQLLHK LQQPKQTLLA  660
QQTALQQPTQ LTQIQDQQKQ LLDKTHNLSR ALTPGQVLEI PPVLQNSLPE ANSISNQMMK  720
ANCQNNIQFS QQPKLQQQQP GLLSEMSGHM AFLPTPTTNQ LSAAGSSILT GAAGAGQSVI  780
TDDVPSCSTS PSTNNCANAL PPLINSRFQR STIVGDDMAQ SAATIFTSSA LETMSSNANL  840
LKDLQPKSEV KPSLNISKNQ NQGHFGPQTY LNGSAAHTDC LDTSSSTTSV CLSQSDAHMH  900
QNNNPLSYNP QSMLFRDNSQ DGEVQADARS NIPYANNIDS QMGMPLNPDS FLTKGTLGLG  960
KDLCNNFSSE GLLGNYENNR DAQQELSSSM VSQTFGVPEM AFNSIDSTID DSNYLNRGTW  1020
APPPAPPPPP LPPAQLQRMR TYTKVYKRGA VGRSIDITRY SGYEELKQDL ARRFGIEGQL  1080
EDQQRIGWKL VYVDHESDVL LVGDDPWEEF VNCVRCIKIL SPQEVQQMSL DGDFGNGGLP  1140
NQACSSSDGG NT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	0.0	ARF family protein