PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX65411.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

bHLH

Protein Properties

Length: 427aa MW: 47092.4 Da PI: 5.4465

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX65411.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	24	6.9e-08	335	375	9	54
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r+RR+ri +++ L++++P K++ a++L +A +Y+k L RDX65411.1 335 ARQRRERISERIRVLQKIVPGG-----SKMDTASMLDEAANYLKFL 375 69****************95.....5**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 427 aa Download sequence
MDGLSWDASS QLVANIPILW STQPQDLEGD HYQSFMPHPS SSVLNQTCYP YPSSEKVRDM 60 VESSTTCEIT SMMPNTNLPQ RIAAMPVKSG AAGASWEEAL TSQSCPSLSV NTNQTSNYEA 120 DFNMAHQQQH LISGKATCSL ESLDCLLSAN NNSNTDTSVE DDGISMMILS DCRNLWNFSY 180 GSAVSSGESE SDMRYPVNEL DETVSRSFSD QYLSQGRVVD SEVICTKTSS SCFSIGQNSS 240 SATEGGFRLI SETSPKSKKA RCDHRHPRSS NINFQQPNSC VSASFEEPDP EAIAQMKEMI 300 YRAAAFRPVN LGLEVVEKPK RKNVRISTDP QTVAARQRRE RISERIRVLQ KIVPGGSKMD 360 TASMLDEAAN YLKFLRSQVK ALENLGHKLD TMNCPATNIA FSFNPSFPIQ TDFSIQNPSS 420 HIQHSKG

Sequence ? help Back to Top

Protein Sequence Length: 427 aa Download sequence

MDGLSWDASS QLVANIPILW STQPQDLEGD HYQSFMPHPS SSVLNQTCYP YPSSEKVRDM  60
VESSTTCEIT SMMPNTNLPQ RIAAMPVKSG AAGASWEEAL TSQSCPSLSV NTNQTSNYEA  120
DFNMAHQQQH LISGKATCSL ESLDCLLSAN NNSNTDTSVE DDGISMMILS DCRNLWNFSY  180
GSAVSSGESE SDMRYPVNEL DETVSRSFSD QYLSQGRVVD SEVICTKTSS SCFSIGQNSS  240
SATEGGFRLI SETSPKSKKA RCDHRHPRSS NINFQQPNSC VSASFEEPDP EAIAQMKEMI  300
YRAAAFRPVN LGLEVVEKPK RKNVRISTDP QTVAARQRRE RISERIRVLQ KIVPGGSKMD  360
TASMLDEAAN YLKFLRSQVK ALENLGHKLD TMNCPATNIA FSFNPSFPIQ TDFSIQNPSS  420
HIQHSKG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	336	341	RQRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21330.1	2e-75	bHLH family protein