PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX65149.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

ARF

Protein Properties

Length: 796aa MW: 88161.2 Da PI: 6.5075

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX65149.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	75.9	4.7e-24	164	265	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 f+k+lt sd++++g +++p++ ae++ + +++ s++l+ +d++g +W++++iyr++++r++lt+GW+ Fv++++L +gD v+F + +++el+ RDX65149.1 164 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyK-QQRPSQELVAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFL--RGENGELR 259 99**************************963.3445679*********************************************..4499999 PP EEEE-S CS B3 94 vkvfrk 99 ++++r+ RDX65149.1 260 LGIRRA 265 ***996 PP
2	Auxin_resp	118.1	7.5e-39	290	372	1	82
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsL 82 +a+a+stk+ F+v+Y+Pras+++Fvv+++k++k++k++vs+G+Rfkm+fe+++s+err+ sGt +g+sdldp+rWp+SkWr+L RDX65149.1 290 VANAISTKTKFHVFYSPRASHADFVVPYQKYVKSIKNPVSIGTRFKMRFEMDESQERRCsSGTLIGTSDLDPYRWPKSKWRCL 372 689******************************************************9********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 796 aa Download sequence
MEIDLNHEVT EVEKNAFCDR ECEKGAGVTC WSSSTCSSSS SSSAPVSSSY LELWHACAGP 60 LTSLPKKGNV VVYFPQGHLE QVASFSPFTP MEIPSYDLQP QIFCRVVNVQ LLANKENDEV 120 YTQVTLLHQA ELEGRHSEGK ELEELGAEEE GDERSPTKST PHMFCKTLTA SDTSTHGGFS 180 VPRRAAEDCF PPLDYKQQRP SQELVAKDLH GVEWKFRHIY RGQPRRHLLT TGWSIFVSQK 240 NLVSGDAVLF LRGENGELRL GIRRAVRPRN DLPESIIGSH NCYPNVLSSV ANAISTKTKF 300 HVFYSPRASH ADFVVPYQKY VKSIKNPVSI GTRFKMRFEM DESQERRCSS GTLIGTSDLD 360 PYRWPKSKWR CLMVRWDEDI ETNHQDRVSP WEIDSSAPLP PLSIQSSPRL KKLRTGLQVA 420 SPSHIITAAR GSGLVGFEES VRSPKVLQGQ ENAGFVSLFY GCDTVTKPPG FEMSSTSHPN 480 LASAEVRKVT SSELSSVHPF SYAGFVETNR FPRVLQGQEI CPLKSLTGKV DMNLGAWGVP 540 NLSCTTFNLH QATKPNFQPA LFPYGDIHQA GQASLFCSKS PSFQRENVPF NKPSTQAGII 600 VNEVGRSDIP NEHKLQDNIS SAASLGAANM GVPNDNNVQG NVNACKLFGF PLSGETTAQN 660 LQNSAKRSCT KVHKQGSLVG RAIDLSRLSG YNDLLSELER LFGMEGLLKD PDKGWRILYT 720 DSENDIMVVG DDPWHEFCDV VSKIHIYTQE EVEKMTIGMM ISDDTHSCLE EAPVIMEASK 780 SSSVGQPDYS PTAVRV

Sequence ? help Back to Top

Protein Sequence Length: 796 aa Download sequence

MEIDLNHEVT EVEKNAFCDR ECEKGAGVTC WSSSTCSSSS SSSAPVSSSY LELWHACAGP  60
LTSLPKKGNV VVYFPQGHLE QVASFSPFTP MEIPSYDLQP QIFCRVVNVQ LLANKENDEV  120
YTQVTLLHQA ELEGRHSEGK ELEELGAEEE GDERSPTKST PHMFCKTLTA SDTSTHGGFS  180
VPRRAAEDCF PPLDYKQQRP SQELVAKDLH GVEWKFRHIY RGQPRRHLLT TGWSIFVSQK  240
NLVSGDAVLF LRGENGELRL GIRRAVRPRN DLPESIIGSH NCYPNVLSSV ANAISTKTKF  300
HVFYSPRASH ADFVVPYQKY VKSIKNPVSI GTRFKMRFEM DESQERRCSS GTLIGTSDLD  360
PYRWPKSKWR CLMVRWDEDI ETNHQDRVSP WEIDSSAPLP PLSIQSSPRL KKLRTGLQVA  420
SPSHIITAAR GSGLVGFEES VRSPKVLQGQ ENAGFVSLFY GCDTVTKPPG FEMSSTSHPN  480
LASAEVRKVT SSELSSVHPF SYAGFVETNR FPRVLQGQEI CPLKSLTGKV DMNLGAWGVP  540
NLSCTTFNLH QATKPNFQPA LFPYGDIHQA GQASLFCSKS PSFQRENVPF NKPSTQAGII  600
VNEVGRSDIP NEHKLQDNIS SAASLGAANM GVPNDNNVQG NVNACKLFGF PLSGETTAQN  660
LQNSAKRSCT KVHKQGSLVG RAIDLSRLSG YNDLLSELER LFGMEGLLKD PDKGWRILYT  720
DSENDIMVVG DDPWHEFCDV VSKIHIYTQE EVEKMTIGMM ISDDTHSCLE EAPVIMEASK  780
SSSVGQPDYS PTAVRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60450.1	0.0	ARF family protein