PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX65141.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

NF-YC

Protein Properties

Length: 416aa MW: 47560.9 Da PI: 6.1315

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX65141.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	118.3	3.5e-37	235	336	2	99
NF-YC 2 lksfwekq...iekatdfk.nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdiv 96 l+sfwekq i+ a+ fk +h+lPlari++++k+d v+misae+P+l+skace+fi elt+r+w++aee+++rt++ +d+a+a+ +td fl++iv RDX65141.1 235 LRSFWEKQllnIQVAEAFKsQHKLPLARIRRVMKSDAAVQMISAETPMLMSKACEIFIQELTFRAWMRAEESNKRTMQPCDVAKAILQTDALHFLTEIV 333 89*****888888999999****************************************************************************** PP NF-YC 97 prd 99 p+d RDX65141.1 334 PND 336 *98 PP

Sequence ? help Back to Top
Protein Sequence Length: 416 aa Download sequence
MDFNSNSVSS SLLPNSMSIP SYPMSQYRQE DREVNNFNLP SNFNSNSIPP NLLSKSMSMP 60 SYPMSQYHQE DRETKNFNLP LNFNANLVLP NLLSNSMLKP SYLMTQDHQE DREANNFNIP 120 LNFNSNFISA NLLPNSMSIP SYLMSQYRQD KEVRNFNLPL DFNNDSVSLN MVSNSVPAPF 180 YPMHHYHKKN IEGSNFNLPK DVNSNSISPN LVSNFMLVPS YPMPQDRQDK EEEKLRSFWE 240 KQLLNIQVAE AFKSQHKLPL ARIRRVMKSD AAVQMISAET PMLMSKACEI FIQELTFRAW 300 MRAEESNKRT MQPCDVAKAI LQTDALHFLT EIVPNDLLHF HAFDAQQEEN AGNIAQGSQA 360 ALPHTAGFMG NPMMNNMGSD LEARNQIIPQ PNMMQPLQPP FMPLDQLPYN FHPKSA

Sequence ? help Back to Top

Protein Sequence Length: 416 aa Download sequence

MDFNSNSVSS SLLPNSMSIP SYPMSQYRQE DREVNNFNLP SNFNSNSIPP NLLSKSMSMP  60
SYPMSQYHQE DRETKNFNLP LNFNANLVLP NLLSNSMLKP SYLMTQDHQE DREANNFNIP  120
LNFNSNFISA NLLPNSMSIP SYLMSQYRQD KEVRNFNLPL DFNNDSVSLN MVSNSVPAPF  180
YPMHHYHKKN IEGSNFNLPK DVNSNSISPN LVSNFMLVPS YPMPQDRQDK EEEKLRSFWE  240
KQLLNIQVAE AFKSQHKLPL ARIRRVMKSD AAVQMISAET PMLMSKACEI FIQELTFRAW  300
MRAEESNKRT MQPCDVAKAI LQTDALHFLT EIVPNDLLHF HAFDAQQEEN AGNIAQGSQA  360
ALPHTAGFMG NPMMNNMGSD LEARNQIIPQ PNMMQPLQPP FMPLDQLPYN FHPKSA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56170.1	1e-30	NF-YC family protein