PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX65011.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

TCP

Protein Properties

Length: 454aa MW: 51436.1 Da PI: 8.583

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX65011.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	139	3.9e-43	185	320	3	133
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa....seceaesssssasnsssg......kaa 91 +kkdrhskihT++g+RdRRvRls+e+a++fFdLqd+L fdk+s+t+eWL+++++ aikel++++ s + +c s s+++++++ + + RDX65011.1 185 AKKDRHSKIHTSQGLRDRRVRLSSEIARKFFDLQDMLEFDKPSNTLEWLFTKSENAIKELAKSKHSGSssggDKC---SCDPSVDSNNNKllvgggDGS 280 79***********************************************************555542223444...333333333333555654434 PP TCP 92 ksaakskksqksaasalnlakesrakarararertrekmrik 133 k k k +q+++ + +kesr++arararert km+ RDX65011.1 281 KGR-KLKWTQRDDV-CVQTKKESRERARARARERTCYKMCSM 320 444.4444444444.488999*****************76 PP

Sequence ? help Back to Top
Protein Sequence Length: 454 aa Download sequence
MKLCGRIQKQ HEVFSQFVLF SAFQKMKKKQ VSSYYNLSPT FYTSCTAQRQ KFITFRIKPI 60 KTRSITLGQF TSAILGFSPT EIGSNLQMFS STYDSNLFPT FPSSSYPILP FLIDPENDFA 120 SNTLLEDPLL VPFIPTTHDP PFPEETVANF AVADCTAMLD QDANTNYGSH YGSISNFLTQ 180 KPAIAKKDRH SKIHTSQGLR DRRVRLSSEI ARKFFDLQDM LEFDKPSNTL EWLFTKSENA 240 IKELAKSKHS GSSSGGDKCS CDPSVDSNNN KLLVGGGDGS KGRKLKWTQR DDVCVQTKKE 300 SRERARARAR ERTCYKMCSM SRRVQQDFDE RCPATATSEM LHQFRSSIQP EPEPCARWVQ 360 PYNPFLVDSE APRDHAFNVI EESIMIKRNM KPSSFMASHH QNLMIPRDAS FNNNDSPLLS 420 YSTPNWDTNG AVNGCSNFCG ISTMNLSTCF MNPW

Sequence ? help Back to Top

Protein Sequence Length: 454 aa Download sequence

MKLCGRIQKQ HEVFSQFVLF SAFQKMKKKQ VSSYYNLSPT FYTSCTAQRQ KFITFRIKPI  60
KTRSITLGQF TSAILGFSPT EIGSNLQMFS STYDSNLFPT FPSSSYPILP FLIDPENDFA  120
SNTLLEDPLL VPFIPTTHDP PFPEETVANF AVADCTAMLD QDANTNYGSH YGSISNFLTQ  180
KPAIAKKDRH SKIHTSQGLR DRRVRLSSEI ARKFFDLQDM LEFDKPSNTL EWLFTKSENA  240
IKELAKSKHS GSSSGGDKCS CDPSVDSNNN KLLVGGGDGS KGRKLKWTQR DDVCVQTKKE  300
SRERARARAR ERTCYKMCSM SRRVQQDFDE RCPATATSEM LHQFRSSIQP EPEPCARWVQ  360
PYNPFLVDSE APRDHAFNVI EESIMIKRNM KPSSFMASHH QNLMIPRDAS FNNNDSPLLS  420
YSTPNWDTNG AVNGCSNFCG ISTMNLSTCF MNPW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	302	312	RERARARARER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67260.2	3e-23	TCP family protein