PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX64873.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

LBD

Protein Properties

Length: 299aa MW: 33024.6 Da PI: 8.9861

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX64873.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	133.2	1e-41	73	172	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrr+Ca++C+++pyf ++p+kfa vhk+FGasnv+k+l ++pe +r da++slvyeA++r+rdPvyG++g i++lqqq+++l+ael+++++ RDX64873.1 73 PCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPEIQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQSLQAELNAVRS 171 7***********************************************************************************************998 PP DUF260 100 e 100 e RDX64873.1 172 E 172 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 299 aa Download sequence
MDGATPFDSK HSFYNISRGV VVEDYYNGGQ LAVSTRERFD EIGKKIKREG DVSSQMGRRH 60 MLGPPGTLNT ITPCAACKLL RRRCAQECPF SPYFSPHEPQ KFASVHKVFG ASNVSKMLME 120 VPEIQRADAA NSLVYEANVR LRDPVYGCMG AISALQQQVQ SLQAELNAVR SEILKYKLRE 180 ANMIPSSHVA MLPSSGAVSI AAPPPPPPPP PPSLPPNSSS SSMYIQQRDP TTYTTISSDN 240 ISYFDASRWN KQRTINKGEK KLGLYAIDDI SIWFGKHCKG WEVGIPGIVG RINFARDDC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40470.1	4e-81	LBD family protein