PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX64354.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

LBD

Protein Properties

Length: 315aa MW: 35533.7 Da PI: 6.2619

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX64354.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	127.9	4.5e-40	36	135	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 aCaaCk++rrkCa+dC+lapyfp++++++f n+hklFG+sn++k++k l+++++++am++++y++++ra dPv G+++ il+lq q+e +ael+l+ + RDX64354.1 36 ACAACKYQRRKCAPDCILAPYFPHDRQRQFLNAHKLFGVSNITKIIKLLSPHDKDQAMRTIIYQSDMRATDPVGGCYRYILDLQAQIEYYRAELDLVLQ 134 7*********************************************************************************************99877 PP DUF260 100 e 100 + RDX64354.1 135 Q 135 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 315 aa Download sequence
MQPKSHTPFF VTPQKAMNNT NNRISTTRNG NSTTQACAAC KYQRRKCAPD CILAPYFPHD 60 RQRQFLNAHK LFGVSNITKI IKLLSPHDKD QAMRTIIYQS DMRATDPVGG CYRYILDLQA 120 QIEYYRAELD LVLQQLAIFR AQAQQRGIYV PTPNNVNVAV NVNVNGDGEV LNADPLGLYS 180 QHHYHCLQPQ PQPQHEQYLI MHENAHNNNA THLQDQLNTW AVQNTTVSLS SLSLQGQSSN 240 VSDEYDHKPV VIDIDSDERS ELGFEPEELV HRSDEAVLFK IDDAVIKAEA DCIQQAQDHD 300 LKGAATSFTL TNCTC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13850.1	6e-56	LBD family protein