PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX64018.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

SBP

Protein Properties

Length: 397aa MW: 43475.8 Da PI: 8.2765

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX64018.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	130.3	6.8e-41	101	177	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 C v+gC++dls++++yhrrhkvCe hsk+p+v+++gl+qrfCqqCsrfh+l++fDe+krsCr+rL++hn+rrrk+q+ RDX64018.1 101 CLVDGCNSDLSNCRDYHRRHKVCELHSKTPEVTIAGLKQRFCQQCSRFHSLEQFDERKRSCRKRLDGHNRRRRKPQP 177 **************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 397 aa Download sequence
MDWNLKAPSW DLVDVDKATS LPSIETMEEQ NRFGVYRMKG EFSVDLKLGQ VGNSGTESAL 60 SKSKDVAAAT SGVGVSKMAS SPSGSSKRAR AINSTTLTVS CLVDGCNSDL SNCRDYHRRH 120 KVCELHSKTP EVTIAGLKQR FCQQCSRFHS LEQFDERKRS CRKRLDGHNR RRRKPQPEPL 180 TRPGSFLSNY QGTQLLPFSS PHIYPSTAMV SPTWSGGLVT SSADARLHNH HHHQVHLVDK 240 QDLFLGSSHK EGKQVAFLHG SHPSTAALSN QTPPFPSPSV CHTLLRTSPL SETCGARSKM 300 FCENLTSNSV HDSPCALSLL SSSQTHTPGN GLNQMVQQAP SMSLMQPLGL SLQDSSLESV 360 ERVLVPNGSD HCSSMYSLGS DGSQCNEAPQ LFPFQWE

Sequence ? help Back to Top

Protein Sequence Length: 397 aa Download sequence

MDWNLKAPSW DLVDVDKATS LPSIETMEEQ NRFGVYRMKG EFSVDLKLGQ VGNSGTESAL  60
SKSKDVAAAT SGVGVSKMAS SPSGSSKRAR AINSTTLTVS CLVDGCNSDL SNCRDYHRRH  120
KVCELHSKTP EVTIAGLKQR FCQQCSRFHS LEQFDERKRS CRKRLDGHNR RRRKPQPEPL  180
TRPGSFLSNY QGTQLLPFSS PHIYPSTAMV SPTWSGGLVT SSADARLHNH HHHQVHLVDK  240
QDLFLGSSHK EGKQVAFLHG SHPSTAALSN QTPPFPSPSV CHTLLRTSPL SETCGARSKM  300
FCENLTSNSV HDSPCALSLL SSSQTHTPGN GLNQMVQQAP SMSLMQPLGL SLQDSSLESV  360
ERVLVPNGSD HCSSMYSLGS DGSQCNEAPQ LFPFQWE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	157	174	RKRSCRKRLDGHNRRRRK
2	157	175	RKRSCRKRLDGHNRRRRKP
3	158	176	RKRSCRKRLDGHNRRRRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50670.1	3e-77	SBP family protein