PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX63689.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 426aa MW: 47729.2 Da PI: 8.6581

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX63689.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.5	1.2e-05	49	71	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H RDX63689.1 49 FVCEICNKGFQRDQNLQLHRRGH 71 89*******************88 PP
2	zf-C2H2	16.5	2.3e-05	125	147	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k++ +s+ k H++t+ RDX63689.1 125 WKCDKCSKRYAVQSDWKAHQKTC 147 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 426 aa Download sequence
MFELENYCQI QISTFTDVMV MMRDEFYVTD PNAEVIALSP TTLMATNRFV CEICNKGFQR 60 DQNLQLHRRG HNLPWKLRQR ASKEVKKRVY VCPEPSCVHH NPARALGDLT GIKKHYNRKH 120 GEKKWKCDKC SKRYAVQSDW KAHQKTCGTR EYKCDCGTIF SSGLVHVKIE HVHLSETCRR 180 DSFITHRAFC DALSEENKRG LTSGIMAGKL QNNELPDFMG TMPLSSSSNN SSVPELNKSM 240 EMFSTTSGTL FGGPKIMSYH HPSSSTLQLS SNNSPVLNYA SASAHMSATA LLHKAAQIGV 300 TASNSINSSY HPFNPPHVPA NQLISDMGMF TPIFVGSSDH SQGFIKNVQQ EVGAFIHGRD 360 VAQGYPMRFG VSADITTVHD FLGVGGATSP QKQQQQRLEL EALIQQRLQI MNHFRDSALD 420 KSIWDI

Sequence ? help Back to Top

Protein Sequence Length: 426 aa Download sequence

MFELENYCQI QISTFTDVMV MMRDEFYVTD PNAEVIALSP TTLMATNRFV CEICNKGFQR  60
DQNLQLHRRG HNLPWKLRQR ASKEVKKRVY VCPEPSCVHH NPARALGDLT GIKKHYNRKH  120
GEKKWKCDKC SKRYAVQSDW KAHQKTCGTR EYKCDCGTIF SSGLVHVKIE HVHLSETCRR  180
DSFITHRAFC DALSEENKRG LTSGIMAGKL QNNELPDFMG TMPLSSSSNN SSVPELNKSM  240
EMFSTTSGTL FGGPKIMSYH HPSSSTLQLS SNNSPVLNYA SASAHMSATA LLHKAAQIGV  300
TASNSINSSY HPFNPPHVPA NQLISDMGMF TPIFVGSSDH SQGFIKNVQQ EVGAFIHGRD  360
VAQGYPMRFG VSADITTVHD FLGVGGATSP QKQQQQRLEL EALIQQRLQI MNHFRDSALD  420
KSIWDI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50700.1	1e-98	C2H2 family protein