PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX63251.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | FAR1 | ||||||||
Protein Properties | Length: 224aa MW: 25816.3 Da PI: 7.0413 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 86 | 5.6e-27 | 77 | 165 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY+eYA+++GF +r+ + ++s+r+g+i r++ C+keg+ + + k ++ r++ra+tr gCka++++k +k+gkw++tk+++eHnH+l+ RDX63251.1 77 FYDEYARHLGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIRGKFTSVRKPRASTREGCKAMIHIKYDKSGKWVITKFVKEHNHPLV 165 9**************************************99999998****************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
MESQLDDGDG RMEVSGDVGL STYEIQIHQE AYEVDPNEGC RVLESSSVGE LGICDDHAIQ 60 EPYEGMEFES EDAAKIFYDE YARHLGFVMR VMSCRRSERD GRILARRLGC NKEGYCVSIR 120 GKFTSVRKPR ASTREGCKAM IHIKYDKSGK WVITKFVKEH NHPLVVSPRE ARQTMDEKDK 180 KIQELTAELR HKKRLCATYQ EQLTSFMKIV EEHSEKLSAK IHHK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G43280.1 | 1e-100 | FAR1 family protein |