PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX63118.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 202aa MW: 24133 Da PI: 9.8751 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 94.2 | 6.1e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien++nrqvt+skRrng++KKA+EL vLCda+v++i+fsstgkl+ey+s RDX63118.1 9 KRIENTTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYIS 59 79***********************************************86 PP | |||||||
2 | K-box | 78.8 | 1.3e-26 | 104 | 186 | 15 | 97 |
K-box 15 eslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 +++q +l+kLk+ ++nL++e+R+++G++L++L++++L+ Le++++k+ k +R++K++++++qi++++kk ++ +e +++L + RDX63118.1 104 QNMQDNLKKLKEVNRNLRKEIRQRMGDCLNDLNMEDLKLLEEEMDKAAKVVRERKYKVITNQIDTQRKKFNNEKEVHNRLLRD 186 89***************************************************************************999875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 202 aa Download sequence |
MARGKIQIKR IENTTNRQVT YSKRRNGLFK KANELTVLCD AKVSIIMFSS TGKLHEYISP 60 STSTKQFFDQ YQMTLGVDLW NSHYEIYCFL PWKLEYIISS FLRQNMQDNL KKLKEVNRNL 120 RKEIRQRMGD CLNDLNMEDL KLLEEEMDKA AKVVRERKYK VITNQIDTQR KKFNNEKEVH 180 NRLLRDLVCI LAYVFVDFNI CN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54340.1 | 5e-59 | MIKC_MADS family protein |