PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX62225.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB_related

Protein Properties

Length: 738aa MW: 79972.1 Da PI: 9.7714

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX62225.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	31.8	3.4e-10	31	81	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqky 47 ++W t E++ll++av+++G ++W+++a +++ + t+ +c +++++ RDX62225.1 31 QAWGTREELLLACAVNRHGFKDWDAVAMEVQcrttrLLATARHCEQKFHDL 81 78********************************99*****999875 PP

Sequence ? help Back to Top
Protein Sequence Length: 738 aa Download sequence
MENHQNHKPE PEPDLDKNHH QHRNQNQNQN QAWGTREELL LACAVNRHGF KDWDAVAMEV 60 QCRTTRLLAT ARHCEQKFHD LNRRFADQCN DDVPPPRQNG AAAGDISDHV PWLDELRKLR 120 VAELRCEVQR RDVSIQSLQL EVKRLEEEKA KENDGKEDEK PDLAVSGEAR PENDKTGGEV 180 EEAGPANSEP DRTANADKMS SLPTTGDESD RENQSVNESN STGSRFEKTG ADDTKLGPGP 240 VSVQTGSKEP DPVARKGKPV GEESNNGSYD TLAKVPTCES VPPSEERKVE EDDDSSELHD 300 SVAHSGEGGT RESSEVQSSA SLTRKRKTRR RKEVSGGDGT SPPPENDEVA MVKSEPLVGV 360 LELIKGHEHS SLFERRLESQ ESDRYKDIVK QPLHLETIQL RLQKGQYSSC TNAFFRDLLL 420 LFTNATVFFP QDSVESQAAR QLHRLVTAEM KNRGQAQSDP IPRKADSLPP NAPLAKPDSL 480 LSKNKASGPI LVCRKRSSML AKPSSATFGQ KGDQPIFNDK KEKPSSDAKS PSKPSSSDTD 540 EEEVPKAKEK PVTGARSLRR SNKNLSNKKL PSNSNPKAGS SGNKPSETLK PEKSKAEGGG 600 PDKKRNAAAD FLKRIKRNTT VEALKGGSGG GGGSGGGGGS SSSSKGGGGG VGVKEQKKTV 660 NNGKGDKGKE RASRHNGGGG SGSGDKRNKN IENNSQSKRS VGRPPKKAAE TNTGSAKRGR 720 ESSASAGKDK RPKKRSKK

Sequence ? help Back to Top

Protein Sequence Length: 738 aa Download sequence

MENHQNHKPE PEPDLDKNHH QHRNQNQNQN QAWGTREELL LACAVNRHGF KDWDAVAMEV  60
QCRTTRLLAT ARHCEQKFHD LNRRFADQCN DDVPPPRQNG AAAGDISDHV PWLDELRKLR  120
VAELRCEVQR RDVSIQSLQL EVKRLEEEKA KENDGKEDEK PDLAVSGEAR PENDKTGGEV  180
EEAGPANSEP DRTANADKMS SLPTTGDESD RENQSVNESN STGSRFEKTG ADDTKLGPGP  240
VSVQTGSKEP DPVARKGKPV GEESNNGSYD TLAKVPTCES VPPSEERKVE EDDDSSELHD  300
SVAHSGEGGT RESSEVQSSA SLTRKRKTRR RKEVSGGDGT SPPPENDEVA MVKSEPLVGV  360
LELIKGHEHS SLFERRLESQ ESDRYKDIVK QPLHLETIQL RLQKGQYSSC TNAFFRDLLL  420
LFTNATVFFP QDSVESQAAR QLHRLVTAEM KNRGQAQSDP IPRKADSLPP NAPLAKPDSL  480
LSKNKASGPI LVCRKRSSML AKPSSATFGQ KGDQPIFNDK KEKPSSDAKS PSKPSSSDTD  540
EEEVPKAKEK PVTGARSLRR SNKNLSNKKL PSNSNPKAGS SGNKPSETLK PEKSKAEGGG  600
PDKKRNAAAD FLKRIKRNTT VEALKGGSGG GGGSGGGGGS SSSSKGGGGG VGVKEQKKTV  660
NNGKGDKGKE RASRHNGGGG SGSGDKRNKN IENNSQSKRS VGRPPKKAAE TNTGSAKRGR  720
ESSASAGKDK RPKKRSKK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	323	328	TRKRKT
2	324	333	RKRKTRRRKE
3	326	335	RKRKTRRRKE
4	730	738	KRPKKRSKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44430.1	9e-80	MYB_related family protein