PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX62215.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | GATA | ||||||||
Protein Properties | Length: 244aa MW: 27240.1 Da PI: 8.2172 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 63.6 | 2.3e-20 | 125 | 159 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C+nC tt+TplWR+gp+g+k+LCnaCG++++k+++ RDX62215.1 125 CANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEER 159 ********************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence |
MHRCCSGSQG HVMGPCTCGM FHSQTTSFSM LFSMPNHKPP YDESNIYDYS FPPSSSSSSS 60 SVDCTLSLGT PSTRFTEDEE KRTRHERRSV SNFCWDLLQS KHNPQSQTKS SRTTNTTDPL 120 LARRCANCDT TSTPLWRNGP RGPKSLCNAC GIRFKKEERR ASAAAATPAV ASGGGMESAQ 180 VYSNSWYAHP QSQKSQKMQC FSPGMENEFR FVDDGDRDSD NGIPFLSWRL NVTDRTSLVH 240 DFTR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50870.1 | 2e-54 | GATA family protein |