PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX61557.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

HD-ZIP

Protein Properties

Length: 316aa MW: 35051.3 Da PI: 8.2779

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX61557.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.8	7.7e-18	149	203	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tkeq Lee F+++ +++ +++ LAk+l+L rqV vWFqNrRa+ k RDX61557.1 149 RKKLRLTKEQSAFLEESFKEHTTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTK 203 788899***********************************************98 PP
2	HD-ZIP_I/II	127.2	7.3e-41	149	239	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +kk+rl+keq+++LEesF+e+++L+p++K +la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+ke +eLr +lk RDX61557.1 149 RKKLRLTKEQSAFLEESFKEHTTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELR-ALK 239 69*************************************************************************************9.555 PP

Sequence ? help Back to Top
Protein Sequence Length: 316 aa Download sequence
MELALSLGDT SKPFTLPTKD TPGFCGRGSD DKRSDAAERK GSSDPPVQLD LLPFTPVLRS 60 QPPSNLRIPW LTQPCGAARA LDVNLFPAAV EDGDDGTSLS SPNSAVSPFQ MDFSMRNGNA 120 AEFGGRNKRE QNDGEGERAS DDDENGSTRK KLRLTKEQSA FLEESFKEHT TLNPKQKLAL 180 AKQLNLRPRQ VEVWFQNRRA RTKLKQTEVD CEYLKRCCET LTEENRRLQK ELQELRALKT 240 SQPFYMQLPA TTLTMCPSCE RVATNSTTAN QTSTVNINNN ASQIPVELSL SKPRILPFPN 300 AQAQSPKAQA HQIASS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	148	154	TRKKLRL
2	198	206	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06710.1	9e-71	HD-ZIP family protein