PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX61478.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB

Protein Properties

Length: 294aa MW: 31238.7 Da PI: 6.9673

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX61478.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	39.2	1.6e-12	11	55	3	45
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 W++e d+ + +a + ++ + +W++Ia+ ++ g+tl+++k+++ RDX61478.1 11 EWSKEQDKAFENALAIHPEDasdRWEKIAADVP-GKTLEEIKHHYE 55 7******************************.********96 PP
2	Myb_DNA-binding	43.8	5.8e-14	121	165	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT++E+ l++ + +++G+g+W++I+r + +Rt+ q+ s+ qky RDX61478.1 121 AWTEDEHRLFLLGLEKYGKGDWRSISRNFVVTRTPTQVASHAQKY 165 6*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 294 aa Download sequence
MTVDEVGSSS EWSKEQDKAF ENALAIHPED ASDRWEKIAA DVPGKTLEEI KHHYELLVED 60 VNQIESGCVP LPSYNSSEGS TSHASDEGAG KKGGHSWNCN NESNHGTKAS RSDQERRKGI 120 AWTEDEHRLF LLGLEKYGKG DWRSISRNFV VTRTPTQVAS HAQKYFIRLN SMNKDRRRSS 180 IHDITSVNNG DVAAPQGPIT GQTNGSAANS AGKSTKPAPP TATAAPGIGI YAAPTIGQPI 240 GGPLVSAVGT PVILPPPTHM AYGLGGPVPG AVVPGAPMNL GSVPYPMPHT SAHR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08520.1	1e-122	MYB family protein