PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX61044.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | LBD | ||||||||
Protein Properties | Length: 245aa MW: 26246 Da PI: 7.9124 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 133.4 | 9e-42 | 45 | 144 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrr+Ca++C+++pyf ++p+kfa+vhk+FGasnv+k+l ++pe +r da++slvyeA+ r+rdPvyG++g i++lqqq+++l+ael+++++ RDX61044.1 45 PCAACKLLRRRCAEECPFSPYFSPHEPQKFAAVHKVFGASNVSKMLMEVPEGQRADAANSLVYEANLRLRDPVYGCMGAISALQQQVQSLQAELNAIRA 143 7**********************************************************************************************9988 PP DUF260 100 e 100 e RDX61044.1 144 E 144 7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MFGLPETDRL DDITKVIAEG EPSSQMGRKH FYGPTPGTTL NTVTPCAACK LLRRRCAEEC 60 PFSPYFSPHE PQKFAAVHKV FGASNVSKML MEVPEGQRAD AANSLVYEAN LRLRDPVYGC 120 MGAISALQQQ VQSLQAELNA IRAEILKYKY REAASLISSH HAALVSSADH AVSVAIPADH 180 SQGLSQPPPL LLPKPLPSPS PKPLPSPSVI LSSLSSSSAS SVYTPPKSSM SLGSISSTEN 240 VPYFV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40470.1 | 6e-67 | LBD family protein |