PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX61016.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

WOX

Protein Properties

Length: 420aa MW: 45921.7 Da PI: 8.0677

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX61016.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.6	8.7e-18	55	115	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++++eq+++Le+ F++ +p ++e++++ ++l ++ +++V++WFqNr+ + k+ RDX61016.1 55 KPRWNPKPEQIRILEAIFNSgMVNPPRDEIRKIRAQLqeygQVGDANVFYWFQNRKSRSKH 115 89***************99***********************************995 PP
2	Wus_type_Homeobox	112	3.2e-36	54	116	2	64
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +++RW+P+peQi+iLe++++sG+++P+++ei++i+a+L+eyG+++d+NVfyWFQNrk+R+++k RDX61016.1 54 PKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHK 116 689**********************************************************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 420 aa Download sequence
MASSNRHWPS MFKSKPCNPH HQWQHDINSS LISTGCHRSP YTSGGGCEER SPEPKPRWNP 60 KPEQIRILEA IFNSGMVNPP RDEIRKIRAQ LQEYGQVGDA NVFYWFQNRK SRSKHKLRHL 120 QNSKNLETQQ NPTSLPQITA PSSSSSSSEK SSPKEIIPTK VFSIGFSNVT DVVPNSPTTS 180 VNQTYFQTHN GSLLPPPPPP SAAPTEAFFF PVQHNGQGVA PSTVTSQGFC FSELSNVVHA 240 QSHAQHHVGP CTSLLLSEIV SHGAAASKKD LEHDKSLKIM HQPSLLNFCV TPTTTAPTTT 300 TLVPPITTSS TTVPSLVIAQ VQGIGDPAAA ARSTVFINDV AFEVAVGPFN VREAFGDDAV 360 LIHATGQPVL TNQWGVTLQS LQHGAYIGSR KLNDEWEVLD MEDKKYLCVC GRPMPPFAVQ

Sequence ? help Back to Top

Protein Sequence Length: 420 aa Download sequence

MASSNRHWPS MFKSKPCNPH HQWQHDINSS LISTGCHRSP YTSGGGCEER SPEPKPRWNP  60
KPEQIRILEA IFNSGMVNPP RDEIRKIRAQ LQEYGQVGDA NVFYWFQNRK SRSKHKLRHL  120
QNSKNLETQQ NPTSLPQITA PSSSSSSSEK SSPKEIIPTK VFSIGFSNVT DVVPNSPTTS  180
VNQTYFQTHN GSLLPPPPPP SAAPTEAFFF PVQHNGQGVA PSTVTSQGFC FSELSNVVHA  240
QSHAQHHVGP CTSLLLSEIV SHGAAASKKD LEHDKSLKIM HQPSLLNFCV TPTTTAPTTT  300
TLVPPITTSS TTVPSLVIAQ VQGIGDPAAA ARSTVFINDV AFEVAVGPFN VREAFGDDAV  360
LIHATGQPVL TNQWGVTLQS LQHGAYIGSR KLNDEWEVLD MEDKKYLCVC GRPMPPFAVQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33880.1	1e-65	WOX family protein