PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX60702.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

NF-YA

Protein Properties

Length: 406aa MW: 44626.8 Da PI: 9.0356

Description

NF-YA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX60702.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CBFB_NFYA	97.4	1.6e-30	203	259	1	58
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 d p+YVNaKQy++I++RRq+Rak+ ++kl +k rkpy+heSRh+hA+rRpRg+gGrF RDX60702.1 203 DGPIYVNAKQYHGIIRRRQSRAKAVLDHKL-TKRRKPYMHESRHRHAMRRPRGCGGRF 259 57**************************.************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 406 aa Download sequence
MGHIVLKGGG GSLLCMKTKA HWREVVYFTA TRLTFEIIFW RVYMAMQSVY LKEHEGNTHS 60 SVGALSSAAS APWWSAFGSQ SVHGESCVQM KSFSLEIPNC IDQLAASKPS ARGPEQVLAK 120 GHTTHFTIFP DDCKMVDDAQ KLQTTISLHS PLTDSHSRFE IGFSQPMICA KYPYSDQFYG 180 LFSAYAPQIS GRIMLPHNMT SDDGPIYVNA KQYHGIIRRR QSRAKAVLDH KLTKRRKPYM 240 HESRHRHAMR RPRGCGGRFL NTKNSVNGNG KSGSEVHKSV GEQLQSSGSQ SSELFQSEVG 300 TMNSSKSSPN ISGSEVTSMF SRGGLDGFSL NHLGSAVHSL ADMIDGGRGL IIPPKWVAAA 360 GNCCNLKVWC SIAPNPSLMR PDEEACCTCV DCDKFRTIGF VLTSAY

Sequence ? help Back to Top

Protein Sequence Length: 406 aa Download sequence

MGHIVLKGGG GSLLCMKTKA HWREVVYFTA TRLTFEIIFW RVYMAMQSVY LKEHEGNTHS  60
SVGALSSAAS APWWSAFGSQ SVHGESCVQM KSFSLEIPNC IDQLAASKPS ARGPEQVLAK  120
GHTTHFTIFP DDCKMVDDAQ KLQTTISLHS PLTDSHSRFE IGFSQPMICA KYPYSDQFYG  180
LFSAYAPQIS GRIMLPHNMT SDDGPIYVNA KQYHGIIRRR QSRAKAVLDH KLTKRRKPYM  240
HESRHRHAMR RPRGCGGRFL NTKNSVNGNG KSGSEVHKSV GEQLQSSGSQ SSELFQSEVG  300
TMNSSKSSPN ISGSEVTSMF SRGGLDGFSL NHLGSAVHSL ADMIDGGRGL IIPPKWVAAA  360
GNCCNLKVWC SIAPNPSLMR PDEEACCTCV DCDKFRTIGF VLTSAY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	218	237	RRRQSRAKAVLDHKLTKRRK
2	218	238	RRRQSRAKAVLDHKLTKRRKP
3	219	239	RRRQSRAKAVLDHKLTKRRKP
4	244	253	RHRHAMRRPR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G05690.1	2e-47	NF-YA family protein