PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX60493.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | MYB | ||||||||
Protein Properties | Length: 234aa MW: 26300.1 Da PI: 9.266 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.4 | 2.8e-17 | 13 | 60 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lv ++++G g+W++ ++ g+ R++k+c++rw +yl RDX60493.1 13 KGPWTAEEDQILVSHIQLYGHGNWRALPKQAGLLRCGKSCRLRWINYL 60 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 47.1 | 5.6e-15 | 66 | 142 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..............................-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..............................tWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE+ ++++++ lG++ +W++Ia+ ++ gRt++++k++w+++l RDX60493.1 66 RGKFSKEEENTILKLHEILGNRlvpimftlgginnsnhnlnvinfivnplmlRWSAIAASLP-GRTDNEIKNFWHTHL 142 89************************************************************.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence |
MRTPCCERMG LKKGPWTAEE DQILVSHIQL YGHGNWRALP KQAGLLRCGK SCRLRWINYL 60 RPDIKRGKFS KEEENTILKL HEILGNRLVP IMFTLGGINN SNHNLNVINF IVNPLMLRWS 120 AIAASLPGRT DNEIKNFWHT HLKKKIDKSG VHNANVCSHI LHETQANSSD ASSVAGNVMI 180 ANYGLPSRKN PPTGFYAAVS SDTCGETMDN HGSSQLSEEM EFWYNIFIKS GQPS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31180.1 | 2e-65 | MYB family protein |