PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX60207.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

HD-ZIP

Protein Properties

Length: 346aa MW: 39067.2 Da PI: 8.4995

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX60207.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56.7	4.1e-18	184	238	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++k+q +Lee F+++++++ +++ LAk+lgL rqV vWFqNrRa+ k RDX60207.1 184 RKKLRLSKDQSIILEESFKEHNTLNPKQKLALAKQLGLRARQVEVWFQNRRARTK 238 788899***********************************************98 PP
2	HD-ZIP_I/II	124.9	3.7e-40	184	273	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rlsk+q+ +LEesF+e+++L+p++K +la++Lgl++rqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+kev+eLr +l RDX60207.1 184 RKKLRLSKDQSIILEESFKEHNTLNPKQKLALAKQLGLRARQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELR-AL 273 69*************************************************************************************9.55 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MIELPTPTHF PPFYIIPSTR LLHFVNPNPS ILTKPQLFFR FTTNTKHTIY LLSHLTREMA 60 VEKEDLGLSL SLSFPHNPPT PLHLNLISSS TYSSSPSGHN PQKPSWNEPF TSSGEAGSFL 120 RGIDVNRLPS AVDCEEEAGV SSPNSTVSSV SGKRSEREIN GEEHDTDRAC YRGNSDEEDA 180 ETSRKKLRLS KDQSIILEES FKEHNTLNPK QKLALAKQLG LRARQVEVWF QNRRARTKLK 240 QTEVDCEFLK RCCENLTEEN RRLQKEVQEL RALKLSPQFY MHMTPPTTLT MCPSCERVAV 300 PPSAVDAATR HHHVPPAHPR PFPIGPWATA AASVPHRPFD ALRPRS

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MIELPTPTHF PPFYIIPSTR LLHFVNPNPS ILTKPQLFFR FTTNTKHTIY LLSHLTREMA  60
VEKEDLGLSL SLSFPHNPPT PLHLNLISSS TYSSSPSGHN PQKPSWNEPF TSSGEAGSFL  120
RGIDVNRLPS AVDCEEEAGV SSPNSTVSSV SGKRSEREIN GEEHDTDRAC YRGNSDEEDA  180
ETSRKKLRLS KDQSIILEES FKEHNTLNPK QKLALAKQLG LRARQVEVWF QNRRARTKLK  240
QTEVDCEFLK RCCENLTEEN RRLQKEVQEL RALKLSPQFY MHMTPPTTLT MCPSCERVAV  300
PPSAVDAATR HHHVPPAHPR PFPIGPWATA AASVPHRPFD ALRPRS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	183	189	SRKKLRL
2	233	241	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16780.1	2e-90	HD-ZIP family protein