PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX58474.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

HD-ZIP

Protein Properties

Length: 337aa MW: 37603.4 Da PI: 8.2367

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX58474.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.2	6.8e-19	176	230	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++k+q +Lee F+++++++ +++ LAk+lgL rqV vWFqNrRa+ k RDX58474.1 176 RKKLRLSKDQSAILEESFKEHNTLNPKQKLALAKQLGLRPRQVEVWFQNRRARTK 230 788899***********************************************98 PP
2	HD-ZIP_I/II	129.4	1.5e-41	176	265	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rlsk+q+++LEesF+e+++L+p++K +la++Lgl+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+kev+eLr +l RDX58474.1 176 RKKLRLSKDQSAILEESFKEHNTLNPKQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEVLKRCCENLTEENRRLQKEVQELR-AL 265 69*************************************************************************************9.55 PP

Sequence ? help Back to Top
Protein Sequence Length: 337 aa Download sequence
ALPNTPKLPS FPSSSSLSFS HLSNTLKTLS LTTQVLQTLT LEMMVQKEDL GLSLGLNFPM 60 NTTNPQHLSL LSSSTQSSSP SGCNPQKPAW NEVFASSDRN SDTCRGETRS FLRGIDVNRL 120 PSAVDCEEEA GVSSPNSTVS SVSGKRSERE PNGEEHDMDR AYSRGISDEE DAETARKKLR 180 LSKDQSAILE ESFKEHNTLN PKQKLALAKQ LGLRPRQVEV WFQNRRARTK LKQTEVDCEV 240 LKRCCENLTE ENRRLQKEVQ ELRALKLSPQ FYMQMTPPTT LTMCPSCERV AVPSSAVDAA 300 PRHHHHPMAQ AHPRPIPIGP WASAAPISHR PFDAFRH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	225	233	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16780.1	1e-101	HD-ZIP family protein