PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RDX57678.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
|
||||||||
Family | GATA | ||||||||
Protein Properties | Length: 161aa MW: 18602.5 Da PI: 9.5244 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 37 | 4.6e-12 | 20 | 44 | 9 | 33 |
GATA 9 TplWRrgpdgnktLCnaCGlyyrkk 33 TplWR+gp+ ++ LCnaCG +yrk RDX57678.1 20 TPLWRNGPEDKPVLCNACGSRYRKW 44 9*******88888**********95 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 161 aa Download sequence |
MLSPIMSQSP TYIYMVLPAT PLWRNGPEDK PVLCNACGSR YRKWGNLENY LPNHFQAEYL 60 DNLNSLEGRS NLFVSSYVTG GKNARLWCPM IPSRKRSRVM YKKITPMKRF QKQLLKMWKN 120 YENLDESSPE EVLLFNNVNN FIPSNEIGLG GVLLKPDYTC A |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G47140.1 | 5e-15 | GATA family protein |