PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA20785.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | LBD | ||||||||
Protein Properties | Length: 181aa MW: 19729.2 Da PI: 6.2275 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 142.8 | 1.1e-44 | 7 | 106 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrrkC ++C++apyfp e+p+kfanvhk+FGasnv+kll++lp+++reda++sl+yeAear++dPvyG+vg i+ lq+q++ql++el+++++ OVA20785.1 7 PCAACKFLRRKCLSGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELPTHQREDAVNSLAYEAEARIKDPVYGCVGAISVLQKQVHQLQEELDAANA 105 7*********************************************************************************************99886 PP DUF260 100 e 100 + OVA20785.1 106 N 106 5 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 181 aa Download sequence |
MASSNSPCAA CKFLRRKCLS GCIFAPYFPP EEPQKFANVH KIFGASNVTK LLNELPTHQR 60 EDAVNSLAYE AEARIKDPVY GCVGAISVLQ KQVHQLQEEL DAANANLIRY ACTESSAALP 120 VSRSRSSSSM ELNRRMGIDH QGGSFYDQSA SSLHLPYLPP PWPDNLSGDM HDMGGGDEGS 180 L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G63090.2 | 1e-68 | LBD family protein |