PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA20632.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 365aa MW: 41856.4 Da PI: 6.0533

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA20632.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.4	5.2e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l ++++ +G g+W+++++ g+ R++k+c++rw +yl OVA20632.1 14 KGLWSPEEDEKLFNYITTFGVGCWSSVPKQAGLERCGKSCRLRWINYL 61 678*******************************************97 PP
2	Myb_DNA-binding	48.9	1.5e-15	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg +++eE++l++ +++ lG++ W+ Ia +++ gRt++++k++w++ OVA20632.1 67 RGMFSQEEEDLIISLHEVLGNR-WAQIATKLP-GRTDNEIKNFWNS 110 788*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MGRHSCCLKP KLRKGLWSPE EDEKLFNYIT TFGVGCWSSV PKQAGLERCG KSCRLRWINY 60 LRPDVKRGMF SQEEEDLIIS LHEVLGNRWA QIATKLPGRT DNEIKNFWNS CLKKKLKQQG 120 IDPNTHQPLN KTEEPNENKL RTKSNATKHG QALAINNNSS SFETGLTNYE AHLDEHFLKK 180 QVFDPFGSFG FQVGSDEMGS NSNLLLQYHQ NFRSPPETHQ GLNFEYGGFT SMPHLTYCDY 240 SNLTEQTDIS ENSSSRISNL FLNETKESSG NSCNLNNQDD QLQMMNMVEN TVFSWNPTET 300 KLESTFHGFQ FNGVKSEDEV KLSSWQEEQK HRHYNAHEGF NFSSFPLTSL SEDPCGVSLD 360 FFEQI

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MGRHSCCLKP KLRKGLWSPE EDEKLFNYIT TFGVGCWSSV PKQAGLERCG KSCRLRWINY  60
LRPDVKRGMF SQEEEDLIIS LHEVLGNRWA QIATKLPGRT DNEIKNFWNS CLKKKLKQQG  120
IDPNTHQPLN KTEEPNENKL RTKSNATKHG QALAINNNSS SFETGLTNYE AHLDEHFLKK  180
QVFDPFGSFG FQVGSDEMGS NSNLLLQYHQ NFRSPPETHQ GLNFEYGGFT SMPHLTYCDY  240
SNLTEQTDIS ENSSSRISNL FLNETKESSG NSCNLNNQDD QLQMMNMVEN TVFSWNPTET  300
KLESTFHGFQ FNGVKSEDEV KLSSWQEEQK HRHYNAHEGF NFSSFPLTSL SEDPCGVSLD  360
FFEQI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	112	118	LKKKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G26660.1	3e-79	MYB family protein