PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA20447.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | FAR1 | ||||||||
Protein Properties | Length: 106aa MW: 12213.8 Da PI: 8.7189 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 41.1 | 5.9e-13 | 34 | 104 | 29 | 90 |
FAR1 29 tkrtfvCske.gkreeekkk.......tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +++ + C++ g+r +++ t+k+r ++++ rt+Cka+l++ ++ g+w v+++++eHnH+l OVA20447.1 34 IEEAYECYQDyGRRMGMHRTksdtsdgTKKKRINTSTMRTNCKARLRIALDPkLGEWFVKSFVEEHNHALL 104 556677765313332222224455777899999******************989***************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 106 aa Download sequence |
MSTSENIEPI DKIQDIDSNK KSRIPSLGTT FSSIEEAYEC YQDYGRRMGM HRTKSDTSDG 60 TKKKRINTST MRTNCKARLR IALDPKLGEW FVKSFVEEHN HALLEV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G12850.1 | 3e-07 | FAR1 family protein |