PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA20332.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family HD-ZIP
Protein Properties Length: 742aa    MW: 82599.4 Da    PI: 5.6466
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA20332.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox67.41.9e-2187142156
                 TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                 r+k +++t+eq++e+e+lF+++++p++++r++L+kklgL  rqVk+WFqNrR++ k
  OVA20332.1  87 RKKYHRHTAEQIKEMEALFKESPHPDEKQRQQLSKKLGLAPRQVKFWFQNRRTQIK 142
                 7999************************************************9877 PP
2START2221.8e-692584812206
                 HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEEC CS
       START   2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevis 86 
                 + ++a++el k+a+++ep+Wv+s+    e++n+de+++ f+++ +      +++e++r++ vv+ +l++lv++++d++ qW+e+++    ka+t++vi 
  OVA20332.1 258 IVNQAMEELTKMATVGEPLWVQSVetgrEILNYDEYIRGFSPESSsngrvrRTIEVSRDTSVVFVDLPRLVQSFMDVN-QWKEMFPnmisKAATVDVIF 355
                 56789************************************998899*******************************.******************** PP

                 TT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXH CS
       START  87 sg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlph 178
                 +g      ga qlm+aelq+l+p+vp R+++f+Ry++q++ ++w+ivdvS+d+ ++   + s+v+++++pSg++ie+ksngh+kv+wveh+++++ ++h
  OVA20332.1 356 NGeganrdGAAQLMFAELQMLTPMVPtREVYFIRYCKQQSPDRWAIVDVSIDNVEDTI-DTSLVKCRKRPSGCIIEDKSNGHCKVIWVEHIECQKTTIH 453
                 ********************************************************87.9*************************************** PP

                 HHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
       START 179 wllrslvksglaegaktwvatlqrqcek 206
                 +l+rs+v+sgla+ga++wv tlq qce+
  OVA20332.1 454 SLYRSTVNSGLAFGARHWVTTLQLQCER 481
                 **************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 742 aa     Download sequence    
MGLDMSNPPA SHTKDFFASP ALSLSLAGIF RDAGGGAAAS MEVEEGDEEM VEISSENTGP  60
GRTDEDDADL EGDDGEEDNN NKNKKKRKKY HRHTAEQIKE MEALFKESPH PDEKQRQQLS  120
KKLGLAPRQV KFWFQNRRTQ IKAIQERHEN SLLKLEMDKL QEENRIMRET IKKACCPNCG  180
FATSTRDPTV TNEEQQLRIE NARLKAEVEK LRATARKFAT GATSPTSSGS AGNDQENRSS  240
LDYYTGIFGL DKSRILEIVN QAMEELTKMA TVGEPLWVQS VETGREILNY DEYIRGFSPE  300
SSSNGRVRRT IEVSRDTSVV FVDLPRLVQS FMDVNQWKEM FPNMISKAAT VDVIFNGEGA  360
NRDGAAQLMF AELQMLTPMV PTREVYFIRY CKQQSPDRWA IVDVSIDNVE DTIDTSLVKC  420
RKRPSGCIIE DKSNGHCKVI WVEHIECQKT TIHSLYRSTV NSGLAFGARH WVTTLQLQCE  480
RLVFFMATNV PTKDSSGVAT LAGRKSILKL AQRMTWSFSR AVGASSHNSW TKIVTKAGDD  540
IRIASRKNLN DPGEPLGVIL CAVSSVWIPI SPHILFDFLR DDVRRTEWDI MSTGGPIQSI  600
ANLSKGQDRG NTVTIQASKS KDSSTWILQD CCTNSYESMV VYAPVDIAEL QSAMTGCDSS  660
KVAILPSGFS ILSDGLETRP LVISSRLEEK TTEGGSLLTM AFQILANSTP TAKLTMESLE  720
TVNTLISCTL QNIRKSLDCE DG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18589KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79840.10.0HD-ZIP family protein