PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA20248.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family HD-ZIP
Protein Properties Length: 839aa    MW: 91873.1 Da    PI: 6.3686
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA20248.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.45.8e-191977357
                --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
    Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                k  ++t+eq+e+Le+l++++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  OVA20248.1 19 KYVRYTPEQVEALERLYHECPKPSSVRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 77
                5679*****************************************************97 PP
2START170.61e-531643722205
                 HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEEEEXX CS
       START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlmvael 98 
                 +aee+++e+++ka+ ++  Wv+++ +++g++++ +++ s++++g a+ra+g+v  +++  v+e+l+d++ W + ++++++l+v+  g  g+++l +++l
  OVA20248.1 164 IAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPT-RVAEILKDRPSWFRECRAVDVLNVLPAGngGTIELLYMQL 261
                 789*******************************************************.8888888888****************9999********** PP

                 TTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHH CS
       START  99 qalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslvksglaega 193
                 +a+++l+p Rdf+ +Ry+  l++g++v++++S++s+q  p+    +++vRae+ pSg+li+p+++g+s +++v h++l+ ++++++lr+l++s+++ ++
  OVA20248.1 262 YAPTTLAPaRDFWLLRYTSGLEDGSLVVCERSLSSTQGGPSmpqVQNFVRAEMPPSGYLIRPCEGGGSLIHIVHHMNLEPWSVPEVLRPLYESSTVLAQ 360
                 ****************************************988889***************************************************** PP

                 HHHHHHTXXXXX CS
       START 194 ktwvatlqrqce 205
                 kt++a+l+++++
  OVA20248.1 361 KTTMAALRQLRQ 372
                 ********9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 839 aa     Download sequence    
MMAVTTSFKE GKNGLDNGKY VRYTPEQVEA LERLYHECPK PSSVRRQQLI RECPILSNIE  60
PKQIKVWFQN RRCREKQRKE ASRLQAVNRK LTAMNKLLME ENDRLQKQVS HLVYENGYFR  120
QQTQNTTLAT TDTSCESVVT SGQHQLTTPQ HPPRDASPAG LLSIAEETLT EFLSKATGTA  180
VEWVQMPGMK PGPDSIGIVA ISHGCTGVAA RACGLVGLEP TRVAEILKDR PSWFRECRAV  240
DVLNVLPAGN GGTIELLYMQ LYAPTTLAPA RDFWLLRYTS GLEDGSLVVC ERSLSSTQGG  300
PSMPQVQNFV RAEMPPSGYL IRPCEGGGSL IHIVHHMNLE PWSVPEVLRP LYESSTVLAQ  360
KTTMAALRQL RQIAQEVSQS TVTGWGRQPA ALRALSQRLS RGFNEAVNGF TDEGWSLMGS  420
DGMDDVTILV NSSPGKILGV NLASSNGLPT MNSSVLCAKA SMLLQNVSPA TLLRFLREHR  480
SEWADSSIDA YAAAAVKVGP CSLPASRVGG IGGQVILPLA HTIEHEEFLE VIKLENIGHC  540
QDTIMYRDMF LLQLCSGVDE NAVGTCAELI FAPIDSSFAD DGPLVPSGFR IIPLDSGVDP  600
SSPNRTLDLA SALEIGPAGN KASGDYSGNG NMRSVMTIAF QFVFESHLQE NVASMARQYV  660
RSIISSVQRV ALALSPSRLS AHGSLRPPSG TPEAHTLARW ICQSYRSSLG VELLKFNGEG  720
SELILKTLWN HSDAIMCCSL KALPVFVFSN QAGLDMLETT MVALQDITLE KIFDDQGRKT  780
LCAEFPQIMQ QGFACLPGGI CLSSMGRPVS YERAVAWKVL DEEENAHCIC FMFINWSFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52150.10.0HD-ZIP family protein