PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA19552.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | SBP | ||||||||
Protein Properties | Length: 188aa MW: 21986.1 Da PI: 6.5117 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 122.2 | 2.3e-38 | 66 | 142 | 1 | 77 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +Cqv++C+ dl a++yhrrhkvCe+h+ka vv + g qr+CqqCsrfh++s+fD++krsCr+rLa+hn+rrrk + OVA19552.1 66 CCQVDNCDRDLGGARRYHRRHKVCEQHAKAVVVSIGGAAQRYCQQCSRFHDISQFDDTKRSCRKRLAGHNQRRRKIN 142 6**************************************************************************86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 188 aa Download sequence |
MKKHEFYEDE EEDEDENEEE GENDGGDEEE EVEEEEERRR KRVVIRFSGE RKGVSISSLS 60 SQTRLCCQVD NCDRDLGGAR RYHRRHKVCE QHAKAVVVSI GGAAQRYCQQ CSRFHDISQF 120 DDTKRSCRKR LAGHNQRRRK INSDLQAQED AEPAVSDMND RSWGSRGHPE RMAMTVRAKP 180 SFKHFQIR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G60030.1 | 2e-33 | SBP family protein |