PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA19377.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family FAR1
Protein Properties Length: 440aa    MW: 51099.2 Da    PI: 7.4444
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA19377.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR191.11.4e-2842127290
        FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                 fY++YA+++GF +r+++  +s r+g++++r++vC+keg+r+++ +k +++r++++ tr gCka+++vk+ek+gkw+v+++++eHnH+l+
  OVA19377.1  42 FYDAYATRMGFVMRVDR--RSLRDGKVICRRLVCNKEGFRKSKPTK-SENRKPKVITREGCKAMIMVKQEKSGKWVVSRFVEEHNHPLV 127
                 9*************997..55679*******************999.9***************************************96 PP
2FAR180.82.3e-25275362289
        FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                 fY++YA++vGF +r+ + ++s+ +g+i +r++ C+keg+  + + k+   r++r++tr gCka++ vk ek+gkw+vt+++++HnH+l
  OVA19377.1 275 FYDDYARRVGFIMRVMSCRRSEVDGRILSRRLGCNKEGHCVSIRGKHGPVRKPRTSTREGCKAMILVKIEKSGKWVVTRFVKDHNHPL 362
                 9**************************************999988889**************************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 440 aa     Download sequence    
MGEEDEMIES STSKELVEFE GDANYEPYIG MEFESEEAAK LFYDAYATRM GFVMRVDRRS  60
LRDGKVICRR LVCNKEGFRK SKPTKSENRK PKVITREGCK AMIMVKQEKS GKWVVSRFVE  120
EHNHPLVISS GNNRRTWLLA QTPDDKDRKI QELSTALQRE KKRSASYQEQ LVIVLKDVEE  180
HTQHLSRKIE DIVQNVRDIE CTKVSLKKKE DCNLGFSNLI FSEVKSMDLE TRLDDGFGAL  240
DCSLDGGEFI DCEEDAILEP YEGMEFESED AAKAFYDDYA RRVGFIMRVM SCRRSEVDGR  300
ILSRRLGCNK EGHCVSIRGK HGPVRKPRTS TREGCKAMIL VKIEKSGKWV VTRFVKDHNH  360
PLEVSARECR HTMDEKDKKI QELTAELRRK KRLCAAYREQ LRTFMKDVEE HNEQLSTKVQ  420
IIVSNMRDVE SEDQELSQHR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1387393LRRKKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.17e-93FAR1 family protein