PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OVA19126.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
|
||||||||
Family | FAR1 | ||||||||
Protein Properties | Length: 253aa MW: 29273.8 Da PI: 5.833 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 70.4 | 4.1e-22 | 67 | 157 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 ++Y +YA++ GF++r++++++s+ + ++ ++vCskeg+r ++ ++++ ++++r+gC+a l++ ++ +kw+vt+++ eHnH+l+ OVA19126.1 67 EYYGAYARRNGFTIRVNRKRRSRIDCAVIGFDYVCSKEGFRPKRCLGEDRTIMLSKQSRVGCRAILVIAYRReIEKWVVTNFVREHNHDLM 157 59******************************************999899999****************99989**************996 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 253 aa Download sequence |
MESTSRQGDD LMGNNMASEG ETSCELETEE CDDTSRNDSQ LVELTGVVGP SEPYIGMEFK 60 SADDGREYYG AYARRNGFTI RVNRKRRSRI DCAVIGFDYV CSKEGFRPKR CLGEDRTIML 120 SKQSRVGCRA ILVIAYRREI EKWVVTNFVR EHNHDLMGPS ELLVRRSSVK ASTEDEKDKR 180 IRELTAELYN ERQRFQRRCS AYEERCAAYK VQLGKILKDV ELHSDHLTER VPGILQTIKE 240 IEDEYFDSQP QSR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G07500.1 | 1e-38 | FAR1 family protein |