PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA18663.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

HD-ZIP

Protein Properties

Length: 220aa MW: 25875.9 Da PI: 6.0738

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA18663.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	61.7	1.1e-19	71	125	3	57
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 k++++++eq++ Le F +++++ e++ +LA++lgL+ rqV vWFqNrRa++k+ OVA18663.1 71 KKRKLSEEQVNLLEMNFGNEHKLECERKDKLASELGLDPRQVAVWFQNRRARWKN 125 45689************************************************95 PP
2	HD-ZIP_I/II	120.4	9e-39	71	162	2	93
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 kkr+ls+eqv+lLE++F +e+kLe erK +la+eLgl+prqvavWFqnrRAR+k+k+lE++y++Lk++++++ e++rLe+ev +L+e+l+e OVA18663.1 71 KKRKLSEEQVNLLEMNFGNEHKLECERKDKLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSKLKSSHENVILEKCRLEAEVLKLKEQLSE 162 9****************************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 220 aa Download sequence
MSNSNSSSSN NEAVEVNDDQ VLLISQLYPD LYSHLIPVLD HQGESNKPRR RRRKSKRGDE 60 TNENNKVGLM KKRKLSEEQV NLLEMNFGNE HKLECERKDK LASELGLDPR QVAVWFQNRR 120 ARWKNKKLEE EYSKLKSSHE NVILEKCRLE AEVLKLKEQL SETEKEFRKL SEQFDRVSSS 180 SPSSSFSMEA DPHFLGEYIV EEYDNLFYLP ENNWVNLYGF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	49	57	RRRRRKSKR
2	49	74	RRRRRKSKRGDETNENNKVGLMKKRK
3	50	75	RRRRRKSKRGDETNENNKVGLMKKRK
4	51	56	RRRKSK
5	51	76	RRRRRKSKRGDETNENNKVGLMKKRK
6	52	77	RRRRRKSKRGDETNENNKVGLMKKRK
7	71	100	KKRKLSEEQVNLLEMNFGNEHKLECERKDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36740.1	4e-53	HD-ZIP family protein